RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 ERN2Q76MJ5 926 aaKnown RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 ARMCX6Q7L4S7 300 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 RABEPKQ7Z6M1 372 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 SRLQ86TD4 932 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 CDKL3Q8IVW4 592 aaPredicted RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 TMEFF1Q8IYR6 380 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 RGL4Q8IZJ4 473 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 TTC13Q8NBP0 860 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 CADM4Q8NFZ8 388 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 OR2T34Q8NGX1 318 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 ZNF641Q96N77 438 aaPredicted RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 OLFM3Q96PB7 478 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 LGMNQ99538 433 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 MGME1Q9BQP7 344 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 HDAC8Q9BY41 377 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 CPEB1Q9BZB8 566 aaKnown RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 DUSP15Q9H1R2 295 aaPredicted RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 CARD9Q9H257 536 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 NT5MQ9NPB1 228 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 SERGEFQ9UGK8 458 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 MBD1Q9UIS9 605 aaPredicted RBP12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 SARDHQ9UL12 918 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 PCDHGA5Q9Y5G8 931 aa12.03□□□□□ -0.48
SDHDP1-201ENST00000588055 THADAQ6YHU6 1953 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 A0A1W2PQ67 120 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PRR23AA6NEV1 266 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 H7C0C1 242 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 KCNK3O14649 394 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 DDX3YO15523 660 aaKnown RBP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PLRG1O43660 514 aaKnown RBP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 EPN2O95208 641 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PIGNO95427 931 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 RETP07949 1114 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PYGMP11217 842 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 ADRB3P13945 408 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 GNSP15586 552 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PECAM1P16284 738 aaPredicted RBP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 CES1P23141 567 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 GKP32189 559 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 ACSL1P33121 698 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 DRD3P35462 400 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PLA2G5P39877 138 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 TNNT3P45378 269 aaPredicted RBP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 ATP5OP48047 213 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 SLC10A2Q12908 348 aaPredicted RBP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 AGBL4Q5VU57 503 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 BRAT1Q6PJG6 821 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PARS2Q7L3T8 475 aaKnown RBP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 ZC3H18Q86VM9 953 aaKnown RBP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 FRMD1Q8N878 549 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 MAML1Q92585 1016 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 RUBCNQ92622 972 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 RAB7BQ96AH8 199 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 KLHL32Q96NJ5 620 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 QKIQ96PU8 341 aaKnown RBP eCLIP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 NUDCD1Q96RS6 583 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 NEUROG2Q9H2A3 272 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 PREBQ9HCU5 417 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 RBM22Q9NW64 420 aaKnown RBP eCLIP12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 SUSD2Q9UGT4 822 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 JRKLQ9Y4A0 524 aa12.02□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3DA0A087WVF3 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3IA0A087WXS9 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3EA0A087X179 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3KA0A087X1G2 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3FA6NER0 549 aaPredicted RBP12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 C16orf96A6NNT2 1141 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3LB9A6J9 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 KCNK1O00180 336 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 INSIG1O15503 277 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 GFRA3O60609 400 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 SOCS5O75159 536 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 FSBPO95073 299 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 PEX11BO96011 259 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3HP0C7X1 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 HOXD12P35452 270 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 MPLP40238 635 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 SUOXP51687 545 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 METAP1P53582 386 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 MAXP61244 160 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 POLR2LP62875 67 aaKnown RBP12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 IFI35P80217 286 aaPredicted RBP12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 OTUD4Q01804 1114 aaKnown RBP12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 ELP6Q0PNE2 266 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 XRCC4Q13426 336 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 PRKD1Q15139 912 aaPredicted RBP12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 NOMO1Q15155 1222 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 ZNF569Q5MCW4 686 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 PIP5KL1Q5T9C9 394 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 DCAF12L1Q5VU92 463 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 KIAA0895LQ68EN5 471 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3GQ6DHY5 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3CQ6IPX1 549 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 ERAP2Q6P179 960 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 NCEH1Q6PIU2 408 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 ZSCAN30Q86W11 494 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 TBC1D3Q8IZP1 549 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms