RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 FBRSQ9HAH7 460 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 GLOD4Q9HC38 313 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 BCCIPQ9P287 314 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 KLHL8Q9P2G9 620 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 AMACRQ9UHK6 382 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 ZNF148Q9UQR1 794 aa10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 DRG1Q9Y295 367 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-213ENST00000587988 EML5Q05BV3 1969 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 ESPNB1AK53 854 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 RNASEH1O60930 286 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 ALDH1A2O94788 518 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 PRNPP04156 253 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 UGT2B4P06133 528 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 ITGAVP06756 1048 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 NFKB1P19838 968 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 COILP38432 576 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 PAFAH1B1P43034 410 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 FNTBP49356 437 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 SKOR1P84550 965 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 RAD51Q06609 339 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 ANGPT1Q15389 498 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 PRPF39Q86UA1 669 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 CAMK1DQ8IU85 385 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 AADATQ8N5Z0 425 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 FRMD1Q8N878 549 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 C12orf50Q8NA57 414 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 PRCCQ92733 491 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 RTP4Q96DX8 246 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 SPATA13Q96N96 652 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 KLHL32Q96NJ5 620 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 RBM15Q96T37 977 aaKnown RBP eCLIP10.83□□□□□ -0.682e-12■■■■□ 21.8
SMARCA4-213ENST00000587988 VAT1Q99536 393 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 GORASP1Q9BQQ3 440 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 DDX47Q9H0S4 455 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 PABPC3Q9H361 631 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 HOMER3Q9NSC5 361 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 RNF14Q9UBS8 474 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 SERGEFQ9UGK8 458 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 CDC23Q9UJX2 597 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 PCDHGC4Q9Y5F7 938 aa10.83□□□□□ -0.68
SMARCA4-213ENST00000587988 A0A1W2PP55 124 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 CFAP69A5D8W1 941 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 C5orf60A6NFR6 353 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 C1QTNF3-AMACRE9PGA6 284 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 KPNA3O00505 521 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 TRAFD1O14545 582 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 AXIN1O15169 862 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF500O60304 480 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 PHF2O75151 1096 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 GCATO75600 419 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 METTL18O95568 372 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 MT-CYBP00156 380 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 IFNB1P01574 187 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 DNTTP04053 509 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 ZSCAN5DPP0CG00 497 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 SP9P0CG40 484 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 C5AR1P21730 350 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 HOXA6P31267 233 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 STIP1P31948 543 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 DRD3P35462 400 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 CD86P42081 329 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 AP1S1P61966 158 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 TRAF2Q12933 501 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 CCDC137Q6PK04 289 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 GDPD4Q6W3E5 623 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 DSG4Q86SJ6 1040 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 ZSWIM9Q86XI8 627 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 ATL2Q8NHH9 583 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 KIF18AQ8NI77 898 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 RLN3Q8WXF3 142 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 TADA1Q96BN2 335 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 IMP4Q96G21 291 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 LRIG1Q96JA1 1093 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 TUBGCP5Q96RT8 1024 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 FERMT1Q9BQL6 677 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 SLC25A51Q9H1U9 297 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 GBA3Q9H227 469 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 SUV39H2Q9H5I1 410 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 ITM2CQ9NQX7 267 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 UBP1Q9NZI7 540 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 USP36Q9P275 1121 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 FBXO4Q9UKT5 387 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 TRHDEQ9UKU6 1024 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 INVSQ9Y283 1065 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF318Q5VUA4 2279 aa10.82□□□□□ -0.68
SMARCA4-213ENST00000587988 GOLGA6L10A0A0M3HER8 536 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 C16orf96A6NNT2 1141 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 HTRA2O43464 458 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 OPHN1O60890 802 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 ADH1BP00325 375 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 ACADMP11310 421 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 ITIH2P19823 946 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 CES1P23141 567 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 PSMB4P28070 264 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 MAPK8P45983 427 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 TPMTP51580 245 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms