RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 EXOC2Q96KP1 924 aa20.08■□□□□ 0.8
TRIM47-204ENST00000587339 PIDD1Q9HB75 910 aa20.08■□□□□ 0.8
TRIM47-204ENST00000587339 MRM3Q9HC36 420 aaKnown RBP20.08■□□□□ 0.8
TRIM47-204ENST00000587339 PSAT1Q9Y617 370 aa20.08■□□□□ 0.8
TRIM47-204ENST00000587339 EPOP01588 193 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 POU2F2P09086 479 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 RGRP47804 291 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 SEPT6Q14141 434 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 INO80DQ53TQ3 878 aaPredicted RBP20.07■□□□□ 0.8
TRIM47-204ENST00000587339 SIRPB2Q5JXA9 342 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 ARMC3Q5W041 872 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 PPP2R2DQ66LE6 453 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 PDPK2PQ6A1A2 396 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 FEM1CQ96JP0 617 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 CPNE1Q99829 537 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 C2orf49Q9BVC5 232 aaPredicted RBP20.07■□□□□ 0.8
TRIM47-204ENST00000587339 CCDC134Q9H6E4 229 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 NOD2Q9HC29 1040 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 PRKAG3Q9UGI9 489 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 VPS51Q9UID3 782 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 ZMYM5Q9UJ78 669 aa20.07■□□□□ 0.8
TRIM47-204ENST00000587339 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.06■□□□□ 0.8
TRIM47-204ENST00000587339 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.06■□□□□ 0.8
TRIM47-204ENST00000587339 HEATR9A2RTY3 570 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 HMX2A2RU54 273 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 INSIG1O15503 277 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 TMCC1O94876 653 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 CD160O95971 181 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 PYGBP11216 843 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 CES1P23141 567 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 GP5P40197 560 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 TEDDM1Q5T9Z0 273 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 CNPY4Q8N129 248 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 RIN3Q8TB24 985 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 GDAP1Q8TB36 358 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 DENND1AQ8TEH3 1009 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 KIAA1522Q9P206 1035 aaPredicted RBP20.06■□□□□ 0.8
TRIM47-204ENST00000587339 MRPS23Q9Y3D9 190 aaKnown RBP20.06■□□□□ 0.8
TRIM47-204ENST00000587339 NDUFAB1O14561 156 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 ZWINTO95229 277 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 PRAMEF12O95522 483 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 ATXN1LP0C7T5 689 aaKnown RBP20.06■□□□□ 0.8
TRIM47-204ENST00000587339 PAMP19021 973 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 CR2P20023 1033 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 HLA-DPA1P20036 260 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 NRIP1P48552 1158 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 SLC18A2Q05940 514 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 SLC14A2Q15849 920 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 FYB2Q5VWT5 728 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 ESRP1Q6NXG1 681 aaKnown RBP20.06■□□□□ 0.8
TRIM47-204ENST00000587339 SH2D5Q6ZV89 423 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 APCDD1Q8J025 514 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 FIBINQ8TAL6 211 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 ING5Q8WYH8 240 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 CHMP6Q96FZ7 201 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 AGAP2Q99490 1192 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 PAIP2Q9BPZ3 127 aaKnown RBP20.06■□□□□ 0.8
TRIM47-204ENST00000587339 NKX2-4Q9H2Z4 354 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 SCUBE2Q9NQ36 999 aa20.06■□□□□ 0.8
TRIM47-204ENST00000587339 HELZP42694 1942 aaKnown RBP20.05■□□□□ 0.8
TRIM47-204ENST00000587339 ERICH4A6NGS2 130 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 RFPL1O75677 317 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 FAM107AO95990 144 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 WDR4P57081 412 aaKnown RBP20.05■□□□□ 0.8
TRIM47-204ENST00000587339 IL9RQ01113 521 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 CBX2Q14781 532 aaPredicted RBP20.05■□□□□ 0.8
TRIM47-204ENST00000587339 SEPT7Q16181 437 aaKnown RBP20.05■□□□□ 0.8
TRIM47-204ENST00000587339 GRTP1Q5TC63 336 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 RETSATQ6NUM9 610 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 RNF135Q8IUD6 432 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 SMG7Q92540 1137 aaKnown RBP20.05■□□□□ 0.8
TRIM47-204ENST00000587339 ACDQ96AP0 544 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 APOPT1Q96IL0 206 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 ZSWIM3Q96MP5 696 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 NUDCD1Q96RS6 583 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 RANBP9Q96S59 729 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 CCT8L2Q96SF2 557 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 FAM107BQ9H098 131 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 LMAN2LQ9H0V9 348 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 MSRAQ9UJ68 235 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 CLEC4EQ9ULY5 219 aa20.05■□□□□ 0.8
TRIM47-204ENST00000587339 GOLGA8TH3BQL2 631 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 TM9SF1O15321 606 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 VAPBO95292 243 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 ASMTLO95671 621 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 FGF1P05230 155 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 ITGA2BP08514 1039 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 CEBPBP17676 345 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 LMAN2Q12907 356 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 DNAJC3Q13217 504 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 MSLNQ13421 630 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-204ENST00000587339 CNGA3Q16281 694 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 DUSP6Q16828 381 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 RNF43Q68DV7 783 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 STRA8Q7Z7C7 330 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 TCP10LQ8TDR4 215 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 GDPD5Q8WTR4 605 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 SLC28A3Q9HAS3 691 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 IARS2Q9NSE4 1012 aaKnown RBP20.04■□□□□ 0.8
TRIM47-204ENST00000587339 TREX1Q9NSU2 369 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms