RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SGK2Q9HBY8 427 aa19.4■□□□□ 0.7
DDX39A-204ENST00000586558 SCUBE2Q9NQ36 999 aa19.4■□□□□ 0.7
DDX39A-204ENST00000586558 SEPT10Q9P0V9 454 aa19.4■□□□□ 0.7
DDX39A-204ENST00000586558 DKK3Q9UBP4 350 aa19.4■□□□□ 0.7
DDX39A-204ENST00000586558 TTC7AQ9ULT0 858 aaPredicted RBP19.4■□□□□ 0.7
DDX39A-204ENST00000586558 ATP8A1Q9Y2Q0 1164 aa19.4■□□□□ 0.7
DDX39A-204ENST00000586558 HRO43593 1189 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 RNASEH2AO75792 299 aaKnown RBP19.39■□□□□ 0.69
DDX39A-204ENST00000586558 STK10O94804 968 aaKnown RBP19.39■□□□□ 0.69
DDX39A-204ENST00000586558 HLA-DQB2P05538 268 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 UGT2B4P06133 528 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 CD6P30203 668 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 DRD3P35462 400 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 TEX44Q53QW1 395 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 DARS2Q6PI48 645 aaKnown RBP19.39■□□□□ 0.69
DDX39A-204ENST00000586558 RASGEF1CQ8N431 466 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 CNTD1Q8N815 330 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 RLN3Q8WXF3 142 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 ATOH1Q92858 354 aaPredicted RBP19.39■□□□□ 0.69
DDX39A-204ENST00000586558 VOPP1Q96AW1 172 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 PCED1AQ9H1Q7 454 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 SEMA4AQ9H3S1 761 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 TRHDEQ9UKU6 1024 aa19.39■□□□□ 0.69
DDX39A-204ENST00000586558 R3HDM2Q9Y2K5 976 aaKnown RBP19.39■□□□□ 0.69
DDX39A-204ENST00000586558 A0A1W2PP55 124 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 CFAP69A5D8W1 941 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 RNF103O00237 685 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 INSIG1O15503 277 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 SOCS5O75159 536 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 PRLRP16471 622 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 PTPN3P26045 913 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 GKP32189 559 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 MAXP61244 160 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 ETF1P62495 437 aaKnown RBP19.38■□□□□ 0.69
DDX39A-204ENST00000586558 BCL2L1Q07817 233 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 ITKQ08881 620 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 WASHC5Q12768 1159 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 CNTN1Q12860 1018 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 LONRF2Q1L5Z9 754 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 SPDYCQ5MJ68 293 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 PAPD7Q5XG87 772 aaKnown RBP19.38■□□□□ 0.69
DDX39A-204ENST00000586558 NCEH1Q6PIU2 408 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 BRAT1Q6PJG6 821 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 ERN2Q76MJ5 926 aaKnown RBP19.38■□□□□ 0.69
DDX39A-204ENST00000586558 CEP68Q76N32 757 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 NKD2Q969F2 451 aaPredicted RBP19.38■□□□□ 0.69
DDX39A-204ENST00000586558 ARRDC3Q96B67 414 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 TOE1Q96GM8 510 aaKnown RBP19.38■□□□□ 0.69
DDX39A-204ENST00000586558 TEKT5Q96M29 485 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 SEMA3CQ99985 751 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 BTBD1Q9H0C5 482 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 SUV39H2Q9H5I1 410 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 NOD2Q9HC29 1040 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 HOMER3Q9NSC5 361 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 WSB2Q9NYS7 404 aaPredicted RBP19.38■□□□□ 0.69
DDX39A-204ENST00000586558 SERGEFQ9UGK8 458 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 TTLL3Q9Y4R7 772 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 R4GN57 208 aa19.38■□□□□ 0.69
DDX39A-204ENST00000586558 A0A1W2PQ67 120 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 TSPAN11A1L157 253 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 PGRMC1O00264 195 aaKnown RBP19.37■□□□□ 0.69
DDX39A-204ENST00000586558 MAP3K13O43283 966 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 CA4P22748 312 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 RBL1P28749 1068 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 SUOXP51687 545 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 NEK3P51956 506 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 METAP1P53582 386 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 ELF2Q15723 593 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 POM121L1PQ3SYA9 428 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 CFAP58Q5T655 872 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 AGBL4Q5VU57 503 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 B4GALNT4Q76KP1 1039 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 ADAT2Q7Z6V5 191 aaKnown RBP19.37■□□□□ 0.69
DDX39A-204ENST00000586558 FAM124AQ86V42 546 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 FAM160A2Q8N612 972 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-204ENST00000586558 SPOCK2Q92563 424 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 RAB7BQ96AH8 199 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 KLHL32Q96NJ5 620 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 AGAP3Q96P47 875 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 FAM118BQ9BPY3 351 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 NEUROG2Q9H2A3 272 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 EPC1Q9H2F5 836 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 KDM4CQ9H3R0 1056 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 CD93Q9NPY3 652 aa19.37■□□□□ 0.69
DDX39A-204ENST00000586558 MBD1Q9UIS9 605 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-204ENST00000586558 PLXND1Q9Y4D7 1925 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 C16orf96A6NNT2 1141 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 KCNN4O15554 427 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 LIASO43766 372 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 NDUFS2O75306 463 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 PIGNO95427 931 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 SERPINF2P08697 491 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 NBL1P41271 181 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 SRSF5Q13243 272 aaKnown RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 SIM2Q14190 667 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 SIX1Q15475 284 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-204ENST00000586558 SLC14A2Q15849 920 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 CCNG2Q16589 344 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 PIP5KL1Q5T9C9 394 aa19.36■□□□□ 0.69
DDX39A-204ENST00000586558 FBXL19Q6PCT2 694 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms