RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ELMOD1Q8N336 334 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 N4BP2L2Q92802 583 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 CLPTM1LQ96KA5 538 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 IL1RL2Q9HB29 575 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 COPG2Q9UBF2 871 aa12.59□□□□□ -0.39
SMARCA4-208ENST00000585799 FAM155AB1AL88 458 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 CLGNO14967 610 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 SNX2O60749 519 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 TBL1XO60907 577 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 SMIM24O75264 130 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 ZNF189O75820 626 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 MPOP05164 745 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 CDC25CP30307 473 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 CDH13P55290 713 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 SLC18A2Q05940 514 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 MBTPS1Q14703 1052 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 AGAP9Q5VTM2 703 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 MAB21L3Q8N8X9 362 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 RTP4Q96DX8 246 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 OSER1Q9NX31 292 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 SOX13Q9UN79 622 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 HBS1LQ9Y450 684 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 GON4LQ3T8J9 2241 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 M0QZQ0 153 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 USP1O94782 785 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 FAM163BP0C2L3 166 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 CALB2P22676 271 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 CCR10P46092 362 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 VEGFBP49765 207 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 NUDT2P50583 147 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 NEK3P51956 506 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 CDK18Q07002 472 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 IRF5Q13568 498 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 SEL1L3Q68CR1 1132 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.58□□□□□ -0.48e-7■■■□□ 15.1
SMARCA4-208ENST00000585799 ARCQ7LC44 396 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 TMEM173Q86WV6 379 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 TSPAN17Q96FV3 270 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 FUBP3Q96I24 572 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 RHOJQ9H4E5 214 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 POMKQ9H5K3 350 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 FETUBQ9UGM5 382 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 KNL1Q8NG31 2342 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 A0A0D9SEW6 157 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 ATP6AP2A0A1C7CYW4 349 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 ADAM12O43184 909 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 ATP6AP2O75787 350 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 MGAT3Q09327 533 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 CCDC153Q494R4 210 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 FRA10AC1Q70Z53 315 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 GLT6D1Q7Z4J2 308 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 ARL14EPQ8N8R7 260 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 EGFL8Q99944 293 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 TCF7L2Q9NQB0 619 aa12.58□□□□□ -0.4
SMARCA4-208ENST00000585799 HCAR3P49019 387 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 COPAP53621 1224 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 DSC3Q14574 896 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 KPNB1Q14974 876 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TNFAIP8L3Q5GJ75 292 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TEDDM1Q5T9Z0 273 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 RPS27LQ71UM5 84 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 LMNTD2Q8IXW0 634 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 ACMSDQ8TDX5 336 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 ARNTL2Q8WYA1 636 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 DNAJC1Q96KC8 554 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 BTBD10Q9BSF8 475 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 PHACTR1Q9C0D0 580 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 ZCWPW1Q9H0M4 648 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 EIF2B3Q9NR50 452 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 KCNK4Q9NYG8 393 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 SEPT3Q9UH03 358 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 PLA2G4CQ9UP65 541 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TCAF1Q9Y4C2 921 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 RBBP6Q7Z6E9 1792 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 HHLA1C9JL84 531 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 NBNO60934 754 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 AHSGP02765 367 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 CHRNGP07510 517 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 POTEHQ6S545 545 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 CCDC97Q96F63 343 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 GATA5Q9BWX5 397 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 UPF3AQ9H1J1 476 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 HACD3Q9P035 362 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 SCML2Q9UQR0 700 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 CDYLQ9Y232 598 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 RAD54BQ9Y620 910 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 C2orf81A6NN90 581 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 ACSL4O60488 711 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 KLHL2O95198 593 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 TFEBP19484 476 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 GABRR2P28476 465 aa12.57□□□□□ -0.4
SMARCA4-208ENST00000585799 SLC1A2P43004 574 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms