RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MAGEB5Q9BZ81 275 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 ZDHHC6Q9H6R6 413 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 GGT7Q9UJ14 662 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 CFAP46Q8IYW2 2715 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 FAM72CH0Y354 149 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 GOLGA8SH3BPF8 625 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 TCEA3O75764 348 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 RHOQP17081 205 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 ETFBP38117 255 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 YPEL5P62699 121 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 PTK2BQ14289 1009 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 NR0B2Q15466 257 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 TAF1BQ53T94 588 aaPredicted RBP14.69□□□□□ -0.06
SDF2-202ENST00000585428 PERM1Q5SV97 790 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 FAM72AQ5TYM5 149 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 TAF3Q5VWG9 929 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 FAM72DQ6L9T8 149 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 NOP9Q86U38 636 aaKnown RBP14.69□□□□□ -0.06
SDF2-202ENST00000585428 FAM72BQ86X60 149 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 OR2AP1Q8NGE2 309 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 IL12RB2Q99665 862 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 TM6SF2Q9BZW4 377 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 SEMA4CQ9C0C4 833 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 CLPBQ9H078 707 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 MAGEH1Q9H213 219 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 TCEAL2Q9H3H9 227 aaPredicted RBP14.69□□□□□ -0.06
SDF2-202ENST00000585428 TMEM248Q9NWD8 314 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 SPASTQ9UBP0 616 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 FHOD1Q9Y613 1164 aa14.69□□□□□ -0.06
SDF2-202ENST00000585428 FAM170AA1A519 330 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 LMO7DNF2Z398 122 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 K7ENP7 123 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 NEMP1O14524 444 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 TOR1BO14657 336 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 CASC3O15234 703 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 YY2O15391 372 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 GSRP00390 522 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 MMEP08473 750 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 PRKCSHP14314 528 aaPredicted RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 UCHL3P15374 230 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 RBMS1P29558 406 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 MAPKAPK2P49137 400 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 ADKP55263 362 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 GEMIN4P57678 1058 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 NOMO3P69849 1222 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 ATP11AP98196 1134 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 C1orf61Q13536 156 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 RAPGEF1Q13905 1077 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 CCDC14Q49A88 953 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 PRRT3Q5FWE3 981 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 C3orf38Q5JPI3 329 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 INO80CQ6PI98 192 aaPredicted RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 RBM44Q6ZP01 1051 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 TTC7BQ86TV6 843 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 SLC35F3Q8IY50 421 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 RBFAQ8N0V3 343 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 EMC1Q8N766 993 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 OR6K2Q8NGY2 324 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 CENPIQ92674 756 aaPredicted RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 KLHL32Q96NJ5 620 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 OSBPL1AQ9BXW6 950 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 STK33Q9BYT3 514 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 MBNL1Q9NR56 388 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 DNAI1Q9UI46 699 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 NEU3Q9UQ49 428 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 ITM2BQ9Y287 266 aa14.68□□□□□ -0.06
SDF2-202ENST00000585428 ASH1LQ9NR48 2969 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 SETXQ7Z333 2677 aaKnown RBP14.68□□□□□ -0.06
SDF2-202ENST00000585428 PMS2P1A4D2B8 440 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 J3QKU1 62 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 KRIT1O00522 736 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 NTN3O00634 580 aaPredicted RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 MUSKO15146 869 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 KDELR3O43731 214 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 MMP20O60882 483 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 UGT2B4P06133 528 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 TIMP2P16035 220 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 EIF4A3P38919 411 aaKnown RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 RPIAP49247 311 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 SNRPD1P62314 119 aaKnown RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 POLD3Q15054 466 aaPredicted RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 C15orf59Q2T9L4 293 aaPredicted RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 ARL13BQ3SXY8 428 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 C6orf132Q5T0Z8 1188 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 GDPD4Q6W3E5 623 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 CLEC14AQ86T13 490 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 RYBPQ8N488 228 aaPredicted RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 RXFP2Q8WXD0 754 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 GLMNQ92990 594 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 CCDC97Q96F63 343 aaPredicted RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 APOBEC3BQ9UH17 382 aaKnown RBP14.67□□□□□ -0.06
SDF2-202ENST00000585428 PADI4Q9UM07 663 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 HPCAL4Q9UM19 191 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 MFHAS1Q9Y4C4 1052 aa14.67□□□□□ -0.06
SDF2-202ENST00000585428 B8ZZF3 427 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 EFSO43281 561 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 LRIG2O94898 1065 aa14.66□□□□□ -0.06
SDF2-202ENST00000585428 CYP1A1P04798 512 aaPredicted RBP14.66□□□□□ -0.06
SDF2-202ENST00000585428 PLEKP08567 350 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms