RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SLF1Q9BQI6 1058 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 LLPHQ9BRT6 129 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SOX7Q9BT81 388 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 TIPINQ9BVW5 301 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 FAM83DQ9H4H8 585 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 LIN7CQ9NUP9 197 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 NKIRAS2Q9NYR9 191 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 IL1RAPL1Q9NZN1 696 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 RAI14Q9P0K7 980 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 PPIEQ9UNP9 301 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SQORQ9Y6N5 450 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 SCN9AQ15858 1988 aa2.03□□□□□ -2.08
SMCHD1-211ENST00000584897 AK9Q5TCS8 1911 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ESYT2A0FGR8 921 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ARHGEF37A1IGU5 675 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SPTLC2O15270 562 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MPPED1O15442 326 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 P4HA2O15460 535 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 DIAPH2O60879 1101 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GLP2RO95838 553 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 AKR1B1P15121 316 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CD19P15391 556 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CALML3P27482 149 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SREBF1P36956 1147 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC26A2P50443 739 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ADAM8P78325 824 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 DCTN2Q13561 401 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 E2F5Q15329 346 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 KYAT1Q16773 422 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MST1LQ2TV78 715 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MFSD14CQ5VZR4 134 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ARMC3Q5W041 872 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 OLFML1Q6UWY5 402 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SEM1Q6ZVN7 128 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 RHOUQ7L0Q8 258 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 AACSQ86V21 672 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GHDCQ8N2G8 530 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SRBD1Q8N5C6 995 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 DNAJB14Q8TBM8 379 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 BPIFB1Q8TDL5 484 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CELF1Q92879 486 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SCAMP4Q969E2 229 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 NSUN4Q96CB9 384 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF653Q96CK0 615 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MRGPRX4Q96LA9 322 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 C7orf26Q96N11 449 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FCRL4Q96PJ5 515 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CENPOQ9BU64 300 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 APOL6Q9BWW8 343 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 NECTIN3Q9NQS3 549 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TMLHEQ9NVH6 421 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 NFU1Q9UMS0 254 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC8A2Q9UPR5 921 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MRPL11Q9Y3B7 192 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GREB1LQ9C091 1923 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 EMSYQ7Z589 1322 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 STK36Q9NRP7 1315 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 RALGAPA2Q2PPJ7 1873 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A0B4J269 797 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TEX13CA0A0J9YWL9 993 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM232C9JQI7 657 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ADM5C9JUS6 153 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 H0YCG3 227 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SEC24DO94855 1032 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 RPN1P04843 607 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PRKCGP05129 697 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 GCFC2P16383 781 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 WT1P19544 449 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 FPR1P21462 350 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PSMC2P35998 433 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PGDP52209 483 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SEC24CP53992 1094 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 PRKAA2P54646 552 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ANTXR2P58335 489 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MECOMQ03112 1051 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ZNF169Q14929 603 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TWIST1Q15672 202 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TBR1Q16650 682 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TSTQ16762 297 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ARHGAP40Q5TG30 622 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM154Q6P9G4 183 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 RTL10Q7L3V2 364 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC105Q8IYK2 499 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 TSPYL6Q8N831 410 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 OR56A3Q8NH54 315 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 ASB12Q8WXK4 309 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 KCNJ9Q92806 393 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 RILPL2Q969X0 211 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CPEB1Q9BZB8 566 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 SLC35C2Q9NQQ7 365 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 EHD2Q9NZN4 543 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MRPL15Q9P015 296 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 POLLQ9UGP5 575 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CA14Q9ULX7 337 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 COL6A3P12111 3177 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 EME2A4GXA9 379 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 CDHR4A6H8M9 788 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 MYO1FO00160 1098 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 LAD1O00515 517 aa2.02□□□□□ -2.09
SMCHD1-211ENST00000584897 DSCR3O14972 297 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms