RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	OTUD3	Q5T2D3	398 aa	Predicted RBP	3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	VWA5B1	Q5TIE3	1220 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	WBP2NL	Q6ICG8	309 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	FBXO38	Q6PIJ6	1188 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	H1FNT	Q75WM6	255 aa	Predicted RBP	3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	CCDC25	Q86WR0	208 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	CMAS	Q8NFW8	434 aa	Predicted RBP	3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	FAM216A	Q8WUB2	273 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	TMEM255B	Q8WV15	326 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	REXO5	Q96IC2	774 aa	Known RBP	3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	APOLD1	Q96LR9	279 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	EPS8L2	Q9H6S3	715 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	ACTR5	Q9H9F9	607 aa	Predicted RBP	3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	RAB21	Q9UL25	225 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	SLC12A4	Q9UP95	1085 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	COPG1	Q9Y678	874 aa	Known RBP	3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	NRXN2	Q9P2S2	1712 aa		3.09	□□□□□ -1.91
VAPA-208	ENST00000584796	CD163L1	Q9NR16	1453 aa		3.09	□□□□□ -1.92
VAPA-208	ENST00000584796	BRCA2	P51587	3418 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	ARFGEF2	Q9Y6D5	1785 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	SLX4	Q8IY92	1834 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	COL6A3	P12111	3177 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796		A0A0B4J293	547 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	PLSCR5	A0PG75	271 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	SAC3D1	A6NKF1	404 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	STMND1	H3BQB6	276 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	HNRNPDL	O14979	420 aa	Known RBP	3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	NCK2	O43639	380 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	LDB2	O43679	373 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	ITGB8	P26012	769 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	EEF1G	P26641	437 aa	Known RBP	3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	AMT	P48728	403 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	TRAF3	Q13114	568 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	ZRSR1	Q15695	479 aa	Known RBP	3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	RAB30	Q15771	203 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	PLK5	Q496M5	336 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	KRTAP5-1	Q6L8H4	278 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	FBXL22	Q6P050	247 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	NOL8	Q76FK4	1167 aa	Known RBP	3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	DPP9	Q86TI2	863 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	MUC20	Q8N307	709 aa	Predicted RBP	3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	RFLNB	Q8N5W9	214 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	DPP10	Q8N608	796 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	TMEM217	Q8N7C4	229 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	LRRC57	Q8N9N7	239 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	FAM110D	Q8TAY7	271 aa	Predicted RBP	3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	WDR60	Q8WVS4	1066 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	ABHD8	Q96I13	439 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	TBCB	Q99426	244 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	SORBS1	Q9BX66	1292 aa	Known RBP	3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	CCDC134	Q9H6E4	229 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	TM7SF3	Q9NS93	570 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	ZDHHC7	Q9NXF8	308 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	PKP3	Q9Y446	797 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	ANKRD36B	Q8N2N9	1353 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796		A0A0C4DFX4	3053 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	HTT	P42858	3142 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	CENPF	P49454	3210 aa		3.08	□□□□□ -1.92
VAPA-208	ENST00000584796	NOTCH3	Q9UM47	2321 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	TRIOBP	Q9H2D6	2365 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	LOC102724159	A0A0B4J2E5	919 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	SNRNP70	P08621	437 aa	Known RBP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	MYZAP	P0CAP1	466 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	HSPA8	P11142	646 aa	Known RBP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	UNG	P13051	313 aa	Predicted RBP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	DPEP1	P16444	411 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	NPPB	P16860	134 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	KLRK1	P26718	216 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	AVPR1A	P37288	418 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	LBX1	P52954	281 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	NUDT6	P53370	316 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	ILF3	Q12906	894 aa	Known RBP eCLIP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	ITPK1	Q13572	414 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	PLCB4	Q15147	1175 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	PWP2	Q15269	919 aa	Known RBP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	HLF	Q16534	295 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	KIF19	Q2TAC6	998 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	ZNF284	Q2VY69	593 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	SLC30A9	Q6PML9	568 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	ANKS1B	Q7Z6G8	1248 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	FJX1	Q86VR8	437 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	NEXN-AS1	Q8NBZ9	246 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	OR14A16	Q8NHC5	309 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	CLEC4C	Q8WTT0	213 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	ZNF566	Q969W8	418 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	DUX5	Q96PT3	197 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	FIZ1	Q96SL8	496 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	NPAS1	Q99742	590 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	IL25	Q9H293	177 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	RETREG1	Q9H6L5	497 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	METTL14	Q9HCE5	456 aa	Known RBP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	IL36RN	Q9UBH0	155 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	TTC21B	Q7Z4L5	1316 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	EIF3A	Q14152	1382 aa	Known RBP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	CCDC7	Q96M83	1385 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	KDM6A	O15550	1401 aa	Predicted RBP	3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	KIF20B	Q96Q89	1820 aa		3.07	□□□□□ -1.92
VAPA-208	ENST00000584796	RANBP2	P49792	3224 aa	Known RBP	3.06	□□□□□ -1.92
VAPA-208	ENST00000584796	TBC1D3D	A0A087WVF3	549 aa		3.06	□□□□□ -1.92
VAPA-208	ENST00000584796	TBC1D3I	A0A087WXS9	549 aa		3.06	□□□□□ -1.92

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