RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 FAM83CQ9BQN1 747 aa14.16□□□□□ -0.14
UBBP4-202ENST00000584755 TRIM56Q9BRZ2 755 aaKnown RBP14.16□□□□□ -0.14
UBBP4-202ENST00000584755 KIFC1Q9BW19 673 aa14.16□□□□□ -0.14
UBBP4-202ENST00000584755 NOD2Q9HC29 1040 aa14.16□□□□□ -0.14
UBBP4-202ENST00000584755 MRM3Q9HC36 420 aaKnown RBP14.16□□□□□ -0.14
UBBP4-202ENST00000584755 SAMD15Q9P1V8 674 aa14.16□□□□□ -0.14
UBBP4-202ENST00000584755 VPS18Q9P253 973 aa14.16□□□□□ -0.14
UBBP4-202ENST00000584755 GGA2Q9UJY4 613 aa14.16□□□□□ -0.14
UBBP4-202ENST00000584755 HS3ST2Q9Y278 367 aa14.16□□□□□ -0.14
UBBP4-202ENST00000584755 MYOFQ9NZM1 2061 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 TTC24A2A3L6 582 aaPredicted RBP14.15□□□□□ -0.14
UBBP4-202ENST00000584755 POLBP06746 335 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 PABPC1P11940 636 aaKnown RBP14.15□□□□□ -0.14
UBBP4-202ENST00000584755 HLA-DPA1P20036 260 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 LTBRP36941 435 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 CSNK1DP48730 415 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 CDK18Q07002 472 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 FCHO2Q0JRZ9 810 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 GRIN2CQ14957 1233 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 SLC1A5Q15758 541 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 KBTBD12Q3ZCT8 623 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 PCID2Q5JVF3 399 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 KCTD16Q68DU8 428 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 CASC4Q6P4E1 433 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 ADGRD1Q6QNK2 874 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 SLC44A1Q8WWI5 657 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 RIPOR3Q96MK2 946 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 RANBP9Q96S59 729 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 MYADMQ96S97 322 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 STMN4Q9H169 189 aaPredicted RBP14.15□□□□□ -0.14
UBBP4-202ENST00000584755 PRKAG3Q9UGI9 489 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 MIA3Q5JRA6 1907 aa14.15□□□□□ -0.14
UBBP4-202ENST00000584755 ZCWPW2A0A1B0GU75 182 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 SMIM23A6NLE4 172 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ATP9BO43861 1147 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 NFATC1O95644 943 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ADH1CP00326 375 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 FGF1P05230 155 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 CISD3P0C7P0 127 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ADH5P11766 374 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 TPH1P17752 444 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 MTHFRP42898 656 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 CHRNA4P43681 627 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 SCNN1BP51168 640 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 SULT2A1Q06520 285 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ADGRE1Q14246 886 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 EFTUD2Q15029 972 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 PDGFRLQ15198 375 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 PCSK7Q16549 785 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ANKRD20A4Q4UJ75 823 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 SIRPB2Q5JXA9 342 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 TANGO2Q6ICL3 276 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 PKN3Q6P5Z2 889 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 TRMT10BQ6PF06 316 aaKnown RBP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 NCEH1Q6PIU2 408 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ADIPOR2Q86V24 386 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ETFBKMTQ8IXQ9 262 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 SH2D3CQ8N5H7 860 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ISG20Q96AZ6 181 aaKnown RBP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 FCRL3Q96P31 734 aaPredicted RBP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 PAFAH2Q99487 392 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 CENPHQ9H3R5 247 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ZFP14Q9HCL3 533 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 SCUBE2Q9NQ36 999 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 SMYD2Q9NRG4 433 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 PSMC3IPQ9P2W1 217 aaPredicted RBP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 CTNNAL1Q9UBT7 734 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 NOVA2Q9UNW9 492 aaKnown RBP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 FCF1Q9Y324 198 aaKnown RBP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 TCAF1Q9Y4C2 921 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 ARIH1Q9Y4X5 557 aaPredicted RBP14.14□□□□□ -0.15
UBBP4-202ENST00000584755 RPS6KL1Q9Y6S9 549 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 FAM169AQ9Y6X4 670 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 REV3LO60673 3130 aa14.14□□□□□ -0.15
UBBP4-202ENST00000584755 POC1B-GALNT4F8VUJ3 575 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 K7ERQ8 282 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 SMAD6O43541 496 aaKnown RBP14.13□□□□□ -0.15
UBBP4-202ENST00000584755 ZNF821O75541 412 aaPredicted RBP14.13□□□□□ -0.15
UBBP4-202ENST00000584755 NDST3O95803 873 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 SRCP12931 536 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 ADRA1DP25100 572 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 ATP5DP30049 168 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 VASPP50552 380 aaPredicted RBP14.13□□□□□ -0.15
UBBP4-202ENST00000584755 RHOAP61586 193 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 AP1S1P61966 158 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 NAB1Q13506 487 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 GAB4Q2WGN9 574 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 VITQ6UXI7 678 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 LRRC6Q86X45 466 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 MFSD6LQ8IWD5 586 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 CYP4X1Q8N118 509 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 AHI1Q8N157 1196 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 DCAKDQ8WVC6 231 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 ATP2A3Q93084 1043 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 EXOC2Q96KP1 924 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 TDRD1Q9BXT4 1180 aaKnown RBP14.13□□□□□ -0.15
UBBP4-202ENST00000584755 CHRAC1Q9NRG0 131 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 THG1LQ9NWX6 298 aaKnown RBP14.13□□□□□ -0.15
UBBP4-202ENST00000584755 CLDND1Q9NY35 253 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms