RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 RPAP2Q8IXW5 612 aaPredicted RBP3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 C11orf65Q8NCR3 313 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 LSM14AQ8ND56 463 aaKnown RBP3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 OR52N4Q8NGI2 321 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 C16orf52Q8NHV5 167 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 UCMAQ8WVF2 138 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 CNOT9Q92600 299 aaKnown RBP3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 PIGKQ92643 395 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 KCNJ9Q92806 393 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 ATP2A3Q93084 1043 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 ZUFSPQ96AP4 578 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 TEFMQ96QE5 360 aaKnown RBP3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 FRG2BQ96QU4 278 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 SIGLEC11Q96RL6 698 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 TM2D2Q9BX73 214 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 ENTPD7Q9NQZ7 604 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 POT1Q9NUX5 634 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 PKP3Q9Y446 797 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 PXDNQ92626 1479 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 IQGAP3Q86VI3 1631 aa3.92□□□□□ -1.78
PPP4R1-229ENST00000584754 NPIPB13A6NJU9 1138 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 NPIPB5A8MRT5 1133 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 TEX22C9J3V5 150 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 NPIPB4C9JG80 1138 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 TNPO2O14787 897 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 INPPL1O15357 1258 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 CD4P01730 458 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RFPL3SP0C7P2 107 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 PRF1P14222 555 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RPS6KB1P23443 525 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 NR4A2P43354 598 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 CPA2P48052 419 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RARSP54136 660 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 NR1H2P55055 460 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 CDH15P55291 814 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ARF3P61204 181 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ARF1P84077 181 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 GALNT2Q10471 571 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 NAA25Q14CX7 972 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RBMS2Q15434 407 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 TWIST1Q15672 202 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ZNF260Q3ZCT1 412 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 C5orf22Q49AR2 442 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ZNF766Q5HY98 468 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 TMEM268Q5VZI3 342 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ZNF474Q6S9Z5 364 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 DHRS13Q6UX07 377 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RBM44Q6ZP01 1051 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 C1orf122Q6ZSJ8 110 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 IRF2BP2Q7Z5L9 587 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 UNC5CLQ8IV45 518 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 BRSK2Q8IWQ3 736 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 FAM185AQ8N0U4 392 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 Q8N9P0 234 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 TDRD7Q8NHU6 1098 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ETNPPLQ8TBG4 499 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 CLEC4CQ8WTT0 213 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 SNRNP27Q8WVK2 155 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 OTULINQ96BN8 352 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RRP36Q96EU6 259 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 GPR78Q96P69 363 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 AGXT2Q9BYV1 514 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RANBP17Q9H2T7 1088 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RMI1Q9H9A7 625 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 DIAPH3Q9NSV4 1193 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 MAP3K20Q9NYL2 800 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 KCND2Q9NZV8 630 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ORC3Q9UBD5 711 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 SLC25A10Q9UBX3 287 aaPredicted RBP3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 HSF4Q9ULV5 492 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 ADGRL2O95490 1459 aa3.91□□□□□ -1.78
PPP4R1-229ENST00000584754 RGPD1P0DJD0 1748 aa3.9□□□□□ -1.78
PPP4R1-229ENST00000584754 TNS1Q9HBL0 1735 aaKnown RBP3.9□□□□□ -1.78
PPP4R1-229ENST00000584754 VPS8Q8N3P4 1428 aa3.9□□□□□ -1.78
PPP4R1-229ENST00000584754 ANKRD50Q9ULJ7 1429 aa3.9□□□□□ -1.78
PPP4R1-229ENST00000584754 C17orf113A0A1B0GUU1 675 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 A0A1W2PPH5 198 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 DPPA5A6NC42 116 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 KCNJ18B7U540 433 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 IKBKBO14920 756 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 F9P00740 461 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 IRF1P10914 325 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 PEPDP12955 493 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 COX7A2P14406 83 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 CAPN3P20807 821 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 HNF1BP35680 557 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 ARL3P36405 182 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 ME1P48163 572 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 CCR9P51686 369 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 YWHAZP63104 245 aaKnown RBP3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 B4GALNT1Q00973 533 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 GALNT3Q14435 633 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 PLK5Q496M5 336 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 C10orf25Q5T742 122 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 SPATA1Q5VX52 437 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 AWAT2Q6E213 333 aa3.9□□□□□ -1.79
PPP4R1-229ENST00000584754 ISM2Q6H9L7 571 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms