RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 NOA1Q8NC60 698 aaKnown RBP18.54■□□□□ 0.56
RFFL-211ENST00000584541 OR6K2Q8NGY2 324 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 CLDN23Q96B33 292 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 LRIG1Q96JA1 1093 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 TUBGCP5Q96RT8 1024 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 MTG2Q9H4K7 406 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 ZDHHC6Q9H6R6 413 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 ATP13A3Q9H7F0 1226 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 NOD2Q9HC29 1040 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 PRSS16Q9NQE7 514 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 VPS45Q9NRW7 570 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 IL36AQ9UHA7 158 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 NEU2Q9Y3R4 380 aa18.54■□□□□ 0.56
RFFL-211ENST00000584541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.53■□□□□ 0.56
RFFL-211ENST00000584541 TMEM221A6NGB7 291 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 F5H423 210 aaPredicted RBP18.53■□□□□ 0.56
RFFL-211ENST00000584541 M0R296 226 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 NDC80O14777 642 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 ADAM23O75077 832 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 METTL18O95568 372 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 PRNPP04156 253 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 SERPINA4P29622 427 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 RPS9P46781 194 aaKnown RBP18.53■□□□□ 0.56
RFFL-211ENST00000584541 BASP1P80723 227 aaKnown RBP18.53■□□□□ 0.56
RFFL-211ENST00000584541 BCL2L1Q07817 233 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 NIPAL4Q0D2K0 466 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 FZD5Q13467 585 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 SLC14A2Q15849 920 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 NCEH1Q6PIU2 408 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 Q6ZS52 159 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 STK40Q8N2I9 435 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 TAB3Q8N5C8 712 aaPredicted RBP18.53■□□□□ 0.56
RFFL-211ENST00000584541 CHST14Q8NCH0 376 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 ARRDC2Q8TBH0 407 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 RBM15Q96T37 977 aaKnown RBP eCLIP18.53■□□□□ 0.56
RFFL-211ENST00000584541 TRIM51Q9BSJ1 452 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 IER2Q9BTL4 223 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 LRRC1Q9BTT6 524 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 OSBPL1AQ9BXW6 950 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 CPEB1Q9BZB8 566 aaKnown RBP18.53■□□□□ 0.56
RFFL-211ENST00000584541 FAM153AQ9UHL3 310 aa18.53■□□□□ 0.56
RFFL-211ENST00000584541 TTC28Q96AY4 2481 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 TTC24A2A3L6 582 aaPredicted RBP18.52■□□□□ 0.56
RFFL-211ENST00000584541 EFCAB8A8MWE9 144 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 C1QTNF3-AMACRE9PGA6 284 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 MPP3Q13368 585 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 CFAP58Q5T655 872 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 FAXCQ5TGI0 409 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 SYT13Q7L8C5 426 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 PCGF5Q86SE9 256 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 OR2T3Q8NH03 318 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 SPATA22Q8NHS9 363 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 GRIN3AQ8TCU5 1115 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 ERP44Q9BS26 406 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 CHRDQ9H2X0 955 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 ETNK1Q9HBU6 452 aa18.52■□□□□ 0.56
RFFL-211ENST00000584541 POLMQ9NP87 494 aaPredicted RBP18.52■□□□□ 0.56
RFFL-211ENST00000584541 ERI2A8K979 691 aaKnown RBP18.51■□□□□ 0.55
RFFL-211ENST00000584541 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
RFFL-211ENST00000584541 SOCS5O75159 536 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 PMPCBO75439 489 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 GJB3O75712 270 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 MT-CYBP00156 380 aaPredicted RBP18.51■□□□□ 0.55
RFFL-211ENST00000584541 MMP2P08253 660 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 MRPS25P82663 173 aaKnown RBP18.51■□□□□ 0.55
RFFL-211ENST00000584541 SKOR1P84550 965 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 SEMA5AQ13591 1074 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 CRY1Q16526 586 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 ARSIQ5FYB1 569 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 TEX35Q5T0J7 233 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 FAM46CQ5VWP2 391 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 GDPD4Q6W3E5 623 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 PRPF39Q86UA1 669 aaKnown RBP18.51■□□□□ 0.55
RFFL-211ENST00000584541 BBOF1Q8ND07 529 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 TMIEQ8NEW7 156 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 IFT43Q96FT9 208 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 SNF8Q96H20 258 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 ZNF641Q96N77 438 aaPredicted RBP18.51■□□□□ 0.55
RFFL-211ENST00000584541 FSD1LQ9BXM9 530 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 TRIM31Q9BZY9 425 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 UBP1Q9NZI7 540 aa18.51■□□□□ 0.55
RFFL-211ENST00000584541 A0A1W2PQ67 120 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 A0A1W2PQF6 199 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 LEFTY1O75610 366 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 HEXIM1O94992 359 aaKnown RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 IL1BP01584 269 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 DCNP07585 359 aaKnown RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 GKP32189 559 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 DGKEP52429 567 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 PCSK7Q16549 785 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 ZNF776Q68DI1 518 aaPredicted RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 CWF19L1Q69YN2 538 aaKnown RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 KIAA1211LQ6NV74 962 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 PKN3Q6P5Z2 889 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 SPEM1Q8N4L4 309 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 IPMKQ8NFU5 416 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 TADA1Q96BN2 335 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 ERLEC1Q96DZ1 483 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 OXNAD1Q96HP4 312 aaPredicted RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 PPP1R16AQ96I34 528 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms