RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 RAPGEF5Q92565 580 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 FAF2Q96CS3 445 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 ZNF670Q9BS34 389 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 EBF2Q9HAK2 575 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 FCF1Q9Y324 198 aaKnown RBP25.27■■□□□ 1.64
TSEN54-209ENST00000583454 MFHAS1Q9Y4C4 1052 aa25.27■■□□□ 1.64
TSEN54-209ENST00000583454 ACACAQ13085 2346 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 CACNA1GO43497 2377 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 TAF4O00268 1085 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 MID1O15344 667 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 PRAMEF11O60813 436 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 ADH1BP00325 375 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 KDELR1P24390 212 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 SLC8A1P32418 973 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 KIAA0895LQ68EN5 471 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 C11orf63Q6NUN7 778 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 LEKR1Q6ZMV7 388 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 ZNF354CQ86Y25 554 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 PCDH19Q8TAB3 1148 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 CCDC114Q96M63 670 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 CALN1Q9BXU9 219 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 TNKS2Q9H2K2 1166 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 PDFQ9HBH1 243 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 KLHL11Q9NVR0 708 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 FBXL12Q9NXK8 326 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 SARDHQ9UL12 918 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 HYOU1Q9Y4L1 999 aa25.26■■□□□ 1.63
TSEN54-209ENST00000583454 FLRT2O43155 660 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 C5AR1P21730 350 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 CTSKP43235 329 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 SFSWAPQ12872 951 aaKnown RBP25.25■■□□□ 1.63
TSEN54-209ENST00000583454 ANKRD20A8PQ5CZ79 823 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 CARD16Q5EG05 197 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 DPY19L3Q6ZPD9 716 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 TP53INP2Q8IXH6 220 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 RHOT1Q8IXI2 618 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 DESI2Q9BSY9 194 aa25.25■■□□□ 1.63
TSEN54-209ENST00000583454 FARP1Q9Y4F1 1045 aaPredicted RBP25.25■■□□□ 1.63
TSEN54-209ENST00000583454 GOLGA4Q13439 2230 aaKnown RBP25.24■■□□□ 1.63
TSEN54-209ENST00000583454 A0A1W2PP55 124 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 ZNF487B1APH4 448 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 J3KR12 359 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 KCNK3O14649 394 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 SPOPO43791 374 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 BNIP3LO60238 219 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 IL1BP01584 269 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 CHRNA3P32297 505 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 PSMD8P48556 350 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 TEAD4Q15561 434 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 FAM46CQ5VWP2 391 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 CCNI2Q6ZMN8 369 aaPredicted RBP25.24■■□□□ 1.63
TSEN54-209ENST00000583454 KIAA1328Q86T90 577 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 VSIG1Q86XK7 387 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 LRRC8AQ8IWT6 810 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 TXLNBQ8N3L3 684 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 AADATQ8N5Z0 425 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 NETO2Q8NC67 525 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 CHST14Q8NCH0 376 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 CCDC112Q8NEF3 446 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 TMIEQ8NEW7 156 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 NEUROG2Q9H2A3 272 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 GOLPH3Q9H4A6 298 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 APOBEC2Q9Y235 224 aaKnown RBP25.24■■□□□ 1.63
TSEN54-209ENST00000583454 LOC400499M0QZD8 3231 aa25.24■■□□□ 1.63
TSEN54-209ENST00000583454 COL5A1P20908 1838 aaPredicted RBP25.23■■□□□ 1.63
TSEN54-209ENST00000583454 C3orf70A6NLC5 250 aaPredicted RBP25.23■■□□□ 1.63
TSEN54-209ENST00000583454 H0Y8X5 98 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 TMCC1O94876 653 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 CTSLP07711 333 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 ATXN1LP0C7T5 689 aaKnown RBP25.23■■□□□ 1.63
TSEN54-209ENST00000583454 RECQLP46063 649 aaPredicted RBP25.23■■□□□ 1.63
TSEN54-209ENST00000583454 NCEH1Q6PIU2 408 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 PQLC3Q8N755 202 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 PIP4K2CQ8TBX8 421 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 FAM131CQ96AQ9 280 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 DDX56Q9NY93 547 aaKnown RBP25.23■■□□□ 1.63
TSEN54-209ENST00000583454 IPO11Q9UI26 975 aaKnown RBP25.23■■□□□ 1.63
TSEN54-209ENST00000583454 FZD4Q9ULV1 537 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 NCKAP1Q9Y2A7 1128 aa25.23■■□□□ 1.63
TSEN54-209ENST00000583454 IGSF10Q6WRI0 2623 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 ATRXP46100 2492 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 A0A1W2PPC4 97 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 DFFAO00273 331 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 ARHGAP6O43182 974 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 PSTPIP1O43586 416 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 GSRP00390 522 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 SERPINB6P35237 376 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 DNA2P51530 1060 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 IL10RBQ08334 325 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 PAFAH1B3Q15102 231 aaKnown RBP25.22■■□□□ 1.63
TSEN54-209ENST00000583454 CYTH1Q15438 398 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 ZFYVE27Q5T4F4 411 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 ARHGAP36Q6ZRI8 547 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 SLC6A18Q96N87 628 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 RNF157Q96PX1 679 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 UBA2Q9UBT2 640 aaPredicted RBP25.22■■□□□ 1.63
TSEN54-209ENST00000583454 ADGRG1Q9Y653 693 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 WASF2Q9Y6W5 498 aa25.22■■□□□ 1.63
TSEN54-209ENST00000583454 LRRD1A4D1F6 860 aa25.21■■□□□ 1.63
TSEN54-209ENST00000583454 FAM47DPA6NHR8 397 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms