RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LAMA1P25391 3075 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 A0A1B0GVT2 93 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 A0A1W2PQU0 124 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 C16orf96A6NNT2 1141 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 MFSD11O43934 449 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 COMTP21964 271 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 KDELR1P24390 212 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 GRIA4P48058 902 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 RACK1P63244 317 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 ZNF235Q14590 738 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 LBRQ14739 615 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 SETMARQ53H47 684 aaPredicted RBP12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 CFAP58Q5T655 872 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 NCBP2-AS2Q69YL0 99 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 DGLUCYQ7Z3D6 616 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 TRIM69Q86WT6 500 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 NSMCE1Q8WV22 266 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 KLK6Q92876 244 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 ZNF599Q96NL3 588 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 ZDHHC5Q9C0B5 715 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 EBF2Q9HAK2 575 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 SEPT3Q9UH03 358 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 SPTBN4Q9H254 2564 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 PCDH15Q96QU1 1955 aa12.77□□□□□ -0.37
SMARCE1-218ENST00000582955 PLXNA2O75051 1894 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 A0A0A6YYK5 440 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 NEMP1O14524 444 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 LATO43561 262 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 MAFKO60675 156 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 OPHN1O60890 802 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 MAP3K6O95382 1288 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 PIGNO95427 931 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 ABL2P42684 1182 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 RGRP47804 291 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 RENBPP51606 427 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 HADHBP55084 474 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 NAP1L1P55209 391 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 C21orf59P57076 290 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC10A7Q0GE19 358 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 GRM3Q14832 879 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 PAFAH1B3Q15102 231 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 LRRC38Q5VT99 294 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 NEK5Q6P3R8 708 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 KIAA1328Q86T90 577 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 SRLQ86TD4 932 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 HORMAD1Q86X24 394 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 BBS5Q8N3I7 341 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 PAF1Q8N7H5 531 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 ACRBPQ8NEB7 543 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 SKA1Q96BD8 255 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 RNF25Q96BH1 459 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 FAF2Q96CS3 445 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 MAK16Q9BXY0 300 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 CPEB1Q9BZB8 566 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 GOLPH3Q9H4A6 298 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 DDX56Q9NY93 547 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 DMTF1Q9Y222 760 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 FADS3Q9Y5Q0 445 aa12.76□□□□□ -0.37
SMARCE1-218ENST00000582955 DCHS1Q96JQ0 3298 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 RCCD1A6NED2 376 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 C10orf142B7Z368 130 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 MUSKO15146 869 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC31A1O15431 190 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 CER1O95813 267 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 PRLRP16471 622 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 XPAP23025 273 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 CD38P28907 300 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 NUDT1P36639 197 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 SCNN1BP51168 640 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 BNC1Q01954 994 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 GBE1Q04446 702 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 GALNT2Q10471 571 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 KIF19Q2TAC6 998 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC45A4Q5BKX6 768 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 LRRC73Q5JTD7 316 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 SEL1L3Q68CR1 1132 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 IL27RAQ6UWB1 636 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 DAAM2Q86T65 1068 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 TTC7BQ86TV6 843 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 CAMK1DQ8IU85 385 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 LRRC49Q8IUZ0 686 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 TMEM139Q8IV31 216 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 PQLC3Q8N755 202 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 RAB7BQ96AH8 199 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 VOPP1Q96AW1 172 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 ZNF830Q96NB3 372 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 RNF157Q96PX1 679 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 PSKH2Q96QS6 385 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 TUBGCP5Q96RT8 1024 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 MYOCQ99972 504 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 SUV39H2Q9H5I1 410 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 GAREM1Q9H706 876 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 ATP13A3Q9H7F0 1226 aa12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 ZFR2Q9UPR6 939 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-218ENST00000582955 ITM2BQ9Y287 266 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms