RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 NCALDP61601 193 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 RFWD2Q8NHY2 731 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 ATXN7L3BQ96GX2 97 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 ZNF778Q96MU6 729 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 SLC40A1Q9NP59 571 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 TREX1Q9NSU2 369 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 CHD7Q9P2D1 2997 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 ZFP69BQ9UJL9 534 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 EMCNQ9ULC0 261 aa22.91■■□□□ 1.26
CCDC47-204ENST00000582252 MYO9BQ13459 2157 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 A0A096LPK6 155 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 A0A0G2JND7 137 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 PRRG1O14668 218 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 SNNO75324 88 aaPredicted RBP22.9■■□□□ 1.26
CCDC47-204ENST00000582252 VAPBO95292 243 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 PAPSS2O95340 614 aaPredicted RBP22.9■■□□□ 1.26
CCDC47-204ENST00000582252 MAXP61244 160 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 OCRLQ01968 901 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 DSC2Q02487 901 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 PLD1Q13393 1074 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 TAF1BQ53T94 588 aaPredicted RBP22.9■■□□□ 1.26
CCDC47-204ENST00000582252 ESRP1Q6NXG1 681 aaKnown RBP22.9■■□□□ 1.26
CCDC47-204ENST00000582252 SLC25A41Q8N5S1 370 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 TADA1Q96BN2 335 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 SIKE1Q9BRV8 207 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 TUBB6Q9BUF5 446 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 TLK1Q9UKI8 766 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 IRAK3Q9Y616 596 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 CHD9Q3L8U1 2897 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 LAMA3Q16787 3333 aa22.9■■□□□ 1.26
CCDC47-204ENST00000582252 CHD5Q8TDI0 1954 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 CCDC195A0A1B0GUA6 201 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 TEX28O15482 410 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 ATP5BP06576 529 aaKnown RBP22.89■■□□□ 1.26
CCDC47-204ENST00000582252 GRK2P25098 689 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 CA8P35219 290 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 ACVRL1P37023 503 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 EPHB3P54753 998 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 GNA12Q03113 381 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 ILF2Q12905 390 aaKnown RBP22.89■■□□□ 1.26
CCDC47-204ENST00000582252 C16orf46Q6P387 395 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 KIAA0408Q6ZU52 694 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 CHST9Q7L1S5 443 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 CMC1Q7Z7K0 106 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 ZC3HC1Q86WB0 502 aaKnown RBP22.89■■□□□ 1.26
CCDC47-204ENST00000582252 DENND1CQ8IV53 801 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 SPPL3Q8TCT6 385 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 KLHL29Q96CT2 875 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 TCF25Q9BQ70 676 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 TMEM120AQ9BXJ8 343 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 TLR9Q9NR96 1032 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 KCNK4Q9NYG8 393 aa22.89■■□□□ 1.26
CCDC47-204ENST00000582252 ZFP37Q9Y6Q3 630 aaPredicted RBP22.89■■□□□ 1.26
CCDC47-204ENST00000582252 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 CCDC78A2IDD5 438 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 HNRNPCL1O60812 293 aaKnown RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 UNC5CO95185 931 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 MMP2P08253 660 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 DLDP09622 509 aaKnown RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 CORO1AP31146 461 aaKnown RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 SLC6A4P31645 630 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ARCN1P48444 511 aaKnown RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 RASSF2P50749 326 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 IRX4P78413 519 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 SLC14A2Q15849 920 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 KDELC2Q7Z4H8 507 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 POF1BQ8WVV4 589 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 IFT43Q96FT9 208 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ATXN3LQ9H3M9 355 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 PDFQ9HBH1 243 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 COPG2Q9UBF2 871 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 HGSO14964 777 aaPredicted RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 STC2O76061 302 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ARHGEF15O94989 841 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 CXCL14O95715 111 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 LATS1O95835 1130 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 TOP3BO95985 862 aaKnown RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 SERPINE1P05121 402 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ADH1AP07327 375 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 HLA-DPA1P20036 260 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ETFBP38117 255 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ZBTB16Q05516 673 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 RFTN1Q14699 578 aaPredicted RBP22.88■■□□□ 1.25
CCDC47-204ENST00000582252 GRM3Q14832 879 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 PPM1JQ5JR12 505 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 TSTD2Q5T7W7 516 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 MBLAC2Q68D91 279 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 IL31Q6EBC2 164 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 RFWD3Q6PCD5 774 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 RAPH1Q70E73 1250 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ITIH5Q86UX2 942 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 CFAP52Q8N1V2 620 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 ARRDC2Q8TBH0 407 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 EMILIN2Q9BXX0 1053 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 FAM96AQ9H5X1 160 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 SAR1AQ9NR31 198 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 TMEM216Q9P0N5 145 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 SEPT3Q9UH03 358 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms