RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 IGHV1OR15-9A0A0B4J2B8 117 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 A0A1W2PP55 124 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 INSIG1O15503 277 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 SLC7A4O43246 635 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 HRO43593 1189 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 RNASEH2AO75792 299 aaKnown RBP20.29■□□□□ 0.84
TOP3A-213ENST00000582230 ITGB7P26010 798 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 SERPINA4P29622 427 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 CD6P30203 668 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 GKP32189 559 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 MAXP61244 160 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 ETF1P62495 437 aaKnown RBP20.29■□□□□ 0.84
TOP3A-213ENST00000582230 BCL2L1Q07817 233 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 ZBTB17Q13105 803 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 PAPD7Q5XG87 772 aaKnown RBP20.29■□□□□ 0.84
TOP3A-213ENST00000582230 NCEH1Q6PIU2 408 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 ADAT2Q7Z6V5 191 aaKnown RBP20.29■□□□□ 0.84
TOP3A-213ENST00000582230 AADATQ8N5Z0 425 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 CNTD1Q8N815 330 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 SLC35B2Q8TB61 432 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 ATOH1Q92858 354 aaPredicted RBP20.29■□□□□ 0.84
TOP3A-213ENST00000582230 FAM131CQ96AQ9 280 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 VOPP1Q96AW1 172 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 HDAC8Q9BY41 377 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 HOMER3Q9NSC5 361 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 DKK3Q9UBP4 350 aa20.29■□□□□ 0.84
TOP3A-213ENST00000582230 R3HDM2Q9Y2K5 976 aaKnown RBP20.29■□□□□ 0.84
TOP3A-213ENST00000582230 STK10O94804 968 aaKnown RBP20.28■□□□□ 0.84
TOP3A-213ENST00000582230 HLA-DQB2P05538 268 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 UGT2B4P06133 528 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 PTPN3P26045 913 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 RBL1P28749 1068 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 DRD3P35462 400 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 WASHC5Q12768 1159 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 CNTN1Q12860 1018 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 POM121L1PQ3SYA9 428 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 ERN2Q76MJ5 926 aaKnown RBP20.28■□□□□ 0.84
TOP3A-213ENST00000582230 ACTRT1Q8TDG2 376 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 TEKT5Q96M29 485 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 KLHL32Q96NJ5 620 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 SEMA3CQ99985 751 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 FAM118BQ9BPY3 351 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 BTBD1Q9H0C5 482 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 NEUROG2Q9H2A3 272 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 SUV39H2Q9H5I1 410 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 SGK2Q9HBY8 427 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 NOD2Q9HC29 1040 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 WSB2Q9NYS7 404 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-213ENST00000582230 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.28■□□□□ 0.84
TOP3A-213ENST00000582230 TRHDEQ9UKU6 1024 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 INVSQ9Y283 1065 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 TTLL3Q9Y4R7 772 aa20.28■□□□□ 0.84
TOP3A-213ENST00000582230 ARIH1Q9Y4X5 557 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-213ENST00000582230 CFAP69A5D8W1 941 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 RNF103O00237 685 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 MAP3K13O43283 966 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 LIASO43766 372 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 NDUFS2O75306 463 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 METAP1P53582 386 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 CCNG2Q16589 344 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 BRAT1Q6PJG6 821 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-213ENST00000582230 CEP68Q76N32 757 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 FAM124AQ86V42 546 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 CAMK1DQ8IU85 385 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 FAM160A2Q8N612 972 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-213ENST00000582230 COG1Q8WTW3 980 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 NKD2Q969F2 451 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-213ENST00000582230 ARRDC3Q96B67 414 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 TOE1Q96GM8 510 aaKnown RBP20.27■□□□□ 0.84
TOP3A-213ENST00000582230 AGAP3Q96P47 875 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 CD93Q9NPY3 652 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 SERGEFQ9UGK8 458 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 DNPEPQ9ULA0 475 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 R4GN57 208 aa20.27■□□□□ 0.84
TOP3A-213ENST00000582230 A0A1W2PQ67 120 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 C16orf96A6NNT2 1141 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 PGRMC1O00264 195 aaKnown RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 KCNN4O15554 427 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SOCS5O75159 536 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 PIGNO95427 931 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 STIP1P31948 543 aaKnown RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 NEK3P51956 506 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SRSF5Q13243 272 aaKnown RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SIM2Q14190 667 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SIX1Q15475 284 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SPDYCQ5MJ68 293 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 CFAP58Q5T655 872 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 FBXL19Q6PCT2 694 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 DRICH1Q6PGQ1 229 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-213ENST00000582230 PID1Q7Z2X4 250 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 FRMD1Q8N878 549 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 ARRDC2Q8TBH0 407 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 C1orf54Q8WWF1 131 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 RAB7BQ96AH8 199 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 CEP41Q9BYV8 373 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 PCED1AQ9H1Q7 454 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SLC25A51Q9H1U9 297 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 KDM4CQ9H3R0 1056 aa20.26■□□□□ 0.83
TOP3A-213ENST00000582230 SEMA4AQ9H3S1 761 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms