RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RFWD2Q8NHY2 731 aa3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 CSGALNACT1Q8TDX6 532 aa3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 C2CD4CQ8TF44 421 aa3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 DDX23Q9BUQ8 820 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 TAF1DQ9H5J8 278 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 ACAD9Q9H845 621 aa3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 EVA1AQ9H8M9 152 aa3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 EBF2Q9HAK2 575 aa3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 CDH22Q9UJ99 828 aa3.54□□□□□ -1.84
SMCHD1-206ENST00000581631 A0A1B0GVM2 712 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 E7EVH7 732 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 IPO5O00410 1097 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 SYN3O14994 580 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 RNMTO43148 476 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 HNRNPRO43390 633 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 DDAH2O95865 285 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 HLA-DQA2P01906 255 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 ACP5P13686 325 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 CHN1P15882 459 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 HOXC13P31276 330 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 CHKAP35790 457 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 CLCNKBP51801 687 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 RHBDL3P58872 404 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 FOXO1Q12778 655 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 FAM69BQ5VUD6 431 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 TBC1D9BQ66K14 1250 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 TANGO2Q6ICL3 276 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 JMJD6Q6NYC1 403 aaPredicted RBP3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 RHBDF2Q6PJF5 856 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 FOXL2NBQ6ZUU3 175 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 TUBA1AQ71U36 451 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 DGLUCYQ7Z3D6 616 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 PALB2Q86YC2 1186 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 ANKRD44Q8N8A2 993 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 PTGR2Q8N8N7 351 aaPredicted RBP3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 DBF4BQ8NFT6 615 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 GPT2Q8TD30 523 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 FAR1Q8WVX9 515 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 RUBCNQ92622 972 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 GOLGA1Q92805 767 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 TMEM18Q96B42 140 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 TUBA1CQ9BQE3 449 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 MSTO1Q9BUK6 570 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 PLEKHA2Q9HB19 425 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 SRP68Q9UHB9 627 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 NFS1Q9Y697 457 aa3.53□□□□□ -1.84
SMCHD1-206ENST00000581631 EDIL3O43854 480 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 MMP3P08254 477 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 FCGR2AP12318 317 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 CYP4B1P13584 511 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 VEGFAP15692 232 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 RBM5P52756 815 aaKnown RBP eCLIP3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 TROAPQ12815 778 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 DHX34Q14147 1143 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 XKR9Q5GH70 373 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 RINLQ6ZS11 566 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 PATL1Q86TB9 770 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 FSIP1Q8NA03 581 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 OR6Y1Q8NGX8 325 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 SECTM1Q8WVN6 248 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 HERC2P3Q9BVR0 1158 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 IFT27Q9BW83 186 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 SCRT2Q9NQ03 307 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 TMLHEQ9NVH6 421 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 KLQ9UEF7 1012 aa3.52□□□□□ -1.85
SMCHD1-206ENST00000581631 EYA2O00167 538 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 CCNT1O60563 726 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 TBX6O95947 436 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 CSF1P09603 554 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 CST5P28325 142 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 AVPR2P30518 371 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 DCTDP32321 178 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 ATP12AP54707 1039 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 BRWD1-AS2P59051 145 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 CUL4BQ13620 913 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 SMAD1Q15797 465 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 RUNDC3AQ59EK9 446 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 C10orf62Q5T681 223 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 GALNT7Q86SF2 657 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 BRSK2Q8IWQ3 736 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 MYCT1Q8N699 235 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 ENAHQ8N8S7 591 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 ZNF485Q8NCK3 441 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 CD101Q93033 1021 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 ZNF385AQ96PM9 386 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 DUX3Q96PT4 197 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 EPYCQ99645 322 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 CADM1Q9BY67 442 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 G6PC2Q9NQR9 355 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 THAP1Q9NVV9 213 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 UPB1Q9UBR1 384 aa3.51□□□□□ -1.85
SMCHD1-206ENST00000581631 IGHV4OR15-8A0A075B7B6 117 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 DDTLA6NHG4 134 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 P2RY10O00398 339 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 TIMM23O14925 209 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 CLGNO14967 610 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 BAG4O95429 457 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 PMS2P2O95744 297 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms