RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PKP1Q13835 747 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 ERV3-1Q14264 604 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 SLC45A4Q5BKX6 768 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 C6orf10Q5SRN2 563 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 SERTAD4-AS1Q5TG53 156 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 KIAA1161Q6NSJ0 714 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 TMTC3Q6ZXV5 915 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 GPAT4Q86UL3 456 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 HORMAD2Q8N7B1 307 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 C11orf65Q8NCR3 313 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 SLC44A5Q8NCS7 719 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 BARD1Q99728 777 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 CHCHD6Q9BRQ6 235 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 WDR83Q9BRX9 315 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 PLEKHA5Q9HAU0 1116 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 PNRC2Q9NPJ4 139 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 KRT84Q9NSB2 600 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 C20orf141Q9NUB4 165 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 KIAA1456Q9P272 454 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 CTNNAL1Q9UBT7 734 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 PIAS3Q9Y6X2 628 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 TTBK1Q5TCY1 1321 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 TDRD9Q8NDG6 1382 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 A0A1W2PQM1 296 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 FAM90A10PA6NDY2 464 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 NPIPB15A6NHN6 443 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 LDLRAD4O15165 306 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 CRYABP02511 175 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 CLEC3BP05452 202 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 SPARCP09486 303 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 SLC2A4P14672 509 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 EDN2P20800 178 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 POU1F1P28069 291 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 ICAM3P32942 547 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 TNFSF8P32971 234 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 RFC1P35251 1148 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 RPS3AP61247 264 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 SLC18A2Q05940 514 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 VEPH1Q14D04 833 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 C10orf25Q5T742 122 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 CLEC4GQ6UXB4 293 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 DEF8Q6ZN54 512 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 SERPINA11Q86U17 422 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 GPSM1Q86YR5 675 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 FAM185AQ8N0U4 392 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 OR4N2Q8NGD1 307 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 ETNPPLQ8TBG4 499 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 MSI2Q96DH6 328 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 KRTAP1-5Q9BYS1 174 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 NUF2Q9BZD4 464 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 RANBP17Q9H2T7 1088 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 WDR6Q9NNW5 1121 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 TBC1D22BQ9NU19 505 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 ZNF580Q9UK33 172 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 COG5Q9UP83 839 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 PSAT1Q9Y617 370 aa4.95□□□□□ -1.62
SMCHD1-205ENST00000581383 C17orf102A2RUQ5 167 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 PI4KAP2A4QPH2 592 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 CD8B2A6NJW9 211 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 ZNF814B7Z6K7 855 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 SNAP23O00161 211 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 HSPB6O14558 160 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 RNASEH2AO75792 299 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 SEC31AO94979 1220 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 CCKARP32238 428 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 ARL1P40616 181 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 EFNA5P52803 228 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 EIF3BP55884 814 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 YWHAZP63104 245 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 SETQ01105 290 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 MTX1Q13505 466 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 TAF11Q15544 211 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 ASPHD1Q5U4P2 390 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 FAM83HQ6ZRV2 1179 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 COLCA1Q6ZS62 124 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 LURAP1LQ8IV03 231 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 FAM217AQ8IXS0 508 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 KIAA2013Q8IYS2 634 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 CADM3Q8N126 398 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 NGEFQ8N5V2 710 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 TMEM174Q8WUU8 243 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 WASF1Q92558 559 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 COQ8BQ96D53 544 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 PIP5K1AQ99755 562 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 GLIS2Q9BZE0 524 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 B3GNT4Q9C0J1 378 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 BRF2Q9HAW0 419 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 RNF146Q9NTX7 359 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 FBXO9Q9UK97 447 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 HS3ST3B1Q9Y662 390 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 SLC4A4Q9Y6R1 1079 aa4.94□□□□□ -1.62
SMCHD1-205ENST00000581383 ZMYM2Q9UBW7 1377 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 A0A0G2JK05 382 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 PRSS47A8MTI9 375 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 IFNL4K9M1U5 179 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 KIF1CO43896 1103 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms