RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 NAP1L3Q99457 506 aaPredicted RBP15.29■□□□□ 0.04
MKS1-210ENST00000581180 VAT1Q99536 393 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 SEMA3CQ99985 751 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 TPSD1Q9BZJ3 242 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 POLR1EQ9GZS1 481 aaKnown RBP15.29■□□□□ 0.04
MKS1-210ENST00000581180 PABPC3Q9H361 631 aaKnown RBP15.29■□□□□ 0.04
MKS1-210ENST00000581180 ZDHHC6Q9H6R6 413 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 NOD2Q9HC29 1040 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 CD93Q9NPY3 652 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 ITM2CQ9NQX7 267 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 BCCIPQ9P287 314 aaKnown RBP eCLIP15.29■□□□□ 0.04
MKS1-210ENST00000581180 SCML1Q9UN30 329 aa15.29■□□□□ 0.04
MKS1-210ENST00000581180 MUC6Q6W4X9 2439 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 CFAP69A5D8W1 941 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 C1QTNF3-AMACRE9PGA6 284 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 KCNN4O15554 427 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 ZNF189O75820 626 aaPredicted RBP15.28■□□□□ 0.04
MKS1-210ENST00000581180 IGLV3-19P01714 112 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 DNTTP04053 509 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 TUBB4AP04350 444 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 C5AR1P21730 350 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 CD68P34810 354 aaPredicted RBP15.28■□□□□ 0.04
MKS1-210ENST00000581180 DRD3P35462 400 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 MAPK8P45983 427 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 DSC2Q02487 901 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 BYSLQ13895 437 aaKnown RBP15.28■□□□□ 0.04
MKS1-210ENST00000581180 GRM3Q14832 879 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 CYP1B1Q16678 543 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 MAP7D1Q3KQU3 841 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 FAM46CQ5VWP2 391 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 LONP2Q86WA8 852 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 AADATQ8N5Z0 425 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
MKS1-210ENST00000581180 PRSS33Q8NF86 280 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 RTP4Q96DX8 246 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 PRRX2Q99811 253 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 TMEM121Q9BTD3 319 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 OSBPL1AQ9BXW6 950 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 GLOD4Q9HC38 313 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 SCUBE2Q9NQ36 999 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
MKS1-210ENST00000581180 DRG1Q9Y295 367 aaKnown RBP15.28■□□□□ 0.04
MKS1-210ENST00000581180 C5orf60A6NFR6 353 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 KIF2AO00139 706 aaPredicted RBP15.27■□□□□ 0.04
MKS1-210ENST00000581180 PDE2AO00408 941 aaPredicted RBP15.27■□□□□ 0.04
MKS1-210ENST00000581180 TRAFD1O14545 582 aaPredicted RBP15.27■□□□□ 0.04
MKS1-210ENST00000581180 PIGNO95427 931 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 UGT2B4P06133 528 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 ITGAVP06756 1048 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 MMP2P08253 660 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 CES1P23141 567 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 ITGB7P26010 798 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 P2RY2P41231 377 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 PI4KAP42356 2102 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 TPMTP51580 245 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 GDF10P55107 478 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 TCF15Q12870 199 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 SNX1Q13596 522 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 TTC31Q49AM3 519 aaPredicted RBP15.27■□□□□ 0.04
MKS1-210ENST00000581180 ZNF805Q5CZA5 627 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 GDPD4Q6W3E5 623 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 USP30Q70CQ3 517 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 CAMK1DQ8IU85 385 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 ZBTB44Q8NCP5 570 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 TADA1Q96BN2 335 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 ECHDC3Q96DC8 303 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 IMP4Q96G21 291 aaKnown RBP15.27■□□□□ 0.04
MKS1-210ENST00000581180 CAPZA3Q96KX2 299 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 ZNF641Q96N77 438 aaPredicted RBP15.27■□□□□ 0.04
MKS1-210ENST00000581180 AP1M1Q9BXS5 423 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 SLC25A51Q9H1U9 297 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 SUV39H2Q9H5I1 410 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 ZSCAN32Q9NX65 697 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 KLHL8Q9P2G9 620 aaPredicted RBP15.27■□□□□ 0.04
MKS1-210ENST00000581180 DKK3Q9UBP4 350 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 RNF14Q9UBS8 474 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 SERGEFQ9UGK8 458 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 TRHDEQ9UKU6 1024 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 TTLL3Q9Y4R7 772 aa15.27■□□□□ 0.04
MKS1-210ENST00000581180 WDFY4Q6ZS81 3184 aa15.27■□□□□ 0.03
MKS1-210ENST00000581180 TNRC6BQ9UPQ9 1833 aaKnown RBP15.27■□□□□ 0.03
MKS1-210ENST00000581180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.26■□□□□ 0.03
MKS1-210ENST00000581180 A0A1W2PP55 124 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 TSPAN11A1L157 253 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 PLK4O00444 970 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 KPNA3O00505 521 aaPredicted RBP15.26■□□□□ 0.03
MKS1-210ENST00000581180 HTRA2O43464 458 aaPredicted RBP15.26■□□□□ 0.03
MKS1-210ENST00000581180 ZNF217O75362 1048 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 NEBLO76041 1014 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 ACADMP11310 421 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 STIP1P31948 543 aaKnown RBP15.26■□□□□ 0.03
MKS1-210ENST00000581180 ITKQ08881 620 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 CNTN1Q12860 1018 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 TRAF2Q12933 501 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 POM121L1PQ3SYA9 428 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 ANKRD20A2Q5SQ80 823 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 ANKRD20A1Q5TYW2 823 aa15.26■□□□□ 0.03
MKS1-210ENST00000581180 ANKRD20A3Q5VUR7 823 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms