RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SIN3BO75182 1162 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 ZNF821O75541 412 aaPredicted RBP14.46□□□□□ -0.09
SKA2-205ENST00000580541 ADH1BP00325 375 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 CR2P20023 1033 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 CXCL12P48061 93 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 LMAN1P49257 510 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 CCR3P51677 355 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 SARNPP82979 210 aaKnown RBP14.46□□□□□ -0.09
SKA2-205ENST00000580541 MPP3Q13368 585 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 TTC27Q6P3X3 843 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 STK40Q8N2I9 435 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 MMGT1Q8N4V1 131 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 CAMKK1Q8N5S9 505 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 BBOF1Q8ND07 529 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 IMP4Q96G21 291 aaKnown RBP14.46□□□□□ -0.09
SKA2-205ENST00000580541 CARD6Q9BX69 1037 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 ADGRE3Q9BY15 652 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 RAB17Q9H0T7 212 aa14.46□□□□□ -0.09
SKA2-205ENST00000580541 EVLQ9UI08 416 aaPredicted RBP14.46□□□□□ -0.09
SKA2-205ENST00000580541 AP3B1O00203 1094 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 SOCS5O75159 536 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 IL1BP01584 269 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 DCNP07585 359 aaKnown RBP14.45□□□□□ -0.1
SKA2-205ENST00000580541 ACADMP11310 421 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 ADCY8P40145 1251 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 GDF10P55107 478 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 MAXP61244 160 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 CDK16Q00536 496 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 C2orf54Q08AI8 447 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 ARSIQ5FYB1 569 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 ATXN7L2Q5T6C5 722 aaPredicted RBP14.45□□□□□ -0.1
SKA2-205ENST00000580541 ZNF776Q68DI1 518 aaPredicted RBP14.45□□□□□ -0.1
SKA2-205ENST00000580541 C8orf74Q6P047 294 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 NCEH1Q6PIU2 408 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 GDPD4Q6W3E5 623 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 TMPRSS6Q8IU80 811 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 PGBD5Q8N414 524 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 ZNF366Q8N895 744 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 PRCCQ92733 491 aaPredicted RBP14.45□□□□□ -0.1
SKA2-205ENST00000580541 IFT43Q96FT9 208 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 EXOC2Q96KP1 924 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 CEP41Q9BYV8 373 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 RSPH9Q9H1X1 276 aaPredicted RBP14.45□□□□□ -0.1
SKA2-205ENST00000580541 SUV39H2Q9H5I1 410 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 ZDHHC6Q9H6R6 413 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 NOD2Q9HC29 1040 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 RAB6BQ9NRW1 208 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 ASIC3Q9UHC3 531 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 PPM1HQ9ULR3 514 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 NCKAP1Q9Y2A7 1128 aa14.45□□□□□ -0.1
SKA2-205ENST00000580541 TECTAO75443 2155 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.44□□□□□ -0.1
SKA2-205ENST00000580541 A0A1W2PQF6 199 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 SMAPO00193 183 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 MUSKO15146 869 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 EPOP01588 193 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 DNTTP04053 509 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 NFKB1P19838 968 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 C5AR1P21730 350 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 RPL22P35268 128 aaKnown RBP14.44□□□□□ -0.1
SKA2-205ENST00000580541 CD86P42081 329 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 SUOXP51687 545 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 RPL26P61254 145 aaKnown RBP14.44□□□□□ -0.1
SKA2-205ENST00000580541 SATB1Q01826 763 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 DSC2Q02487 901 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 GPS1Q13098 491 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 PTK6Q13882 451 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 TTC31Q49AM3 519 aaPredicted RBP14.44□□□□□ -0.1
SKA2-205ENST00000580541 ZNF805Q5CZA5 627 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 ARMC12Q5T9G4 340 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 BRAT1Q6PJG6 821 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 Q6ZS52 159 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 LINC00523Q86TU6 105 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 PGBD3Q8N328 593 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 FBXL6Q8N531 539 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.44□□□□□ -0.1
SKA2-205ENST00000580541 TSTD1Q8NFU3 115 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 ARRDC2Q8TBH0 407 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 PIP4K2CQ8TBX8 421 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 SIPA1Q96FS4 1042 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 SRPK1Q96SB4 655 aaKnown RBP14.44□□□□□ -0.1
SKA2-205ENST00000580541 FAM129BQ96TA1 746 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 FSD1LQ9BXM9 530 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 ZDHHC4Q9NPG8 344 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 BCCIPQ9P287 314 aaKnown RBP eCLIP14.44□□□□□ -0.1
SKA2-205ENST00000580541 DKK3Q9UBP4 350 aa14.44□□□□□ -0.1
SKA2-205ENST00000580541 RPL26L1Q9UNX3 145 aaKnown RBP14.44□□□□□ -0.1
SKA2-205ENST00000580541 CKAP5Q14008 2032 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 TCRBV21S2A2A0A5A6 115 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 KPNA3O00505 521 aaPredicted RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 LEFTY1O75610 366 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 APBB3O95704 486 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 CHRM1P11229 460 aaPredicted RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 XPAP23025 273 aaPredicted RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 PSMB4P28070 264 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 CD68P34810 354 aaPredicted RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 PTGIRP43119 386 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 EPHB1P54762 984 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 BASP1P80723 227 aaKnown RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 MTAPQ13126 283 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms