RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 FLNCQ14315 2725 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 USP9XQ93008 2570 aaPredicted RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 UBR5O95071 2799 aaPredicted RBP6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 SPTA1P02549 2419 aa6.85□□□□□ -1.31
PPP4R1-216ENST00000580283 ATXN2Q99700 1313 aaKnown RBP6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 BSNQ9UPA5 3926 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 A0A087WV48 116 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 EIF4E1BA6NMX2 242 aaKnown RBP6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 M0QZQ0 153 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 CBFA2T3O75081 653 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 FTH1P19P0C7X4 201 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 IFNAR1P17181 557 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 CDK11BP21127 795 aaKnown RBP6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 MGAT1P26572 445 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 GUCY2FP51841 1108 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 GPR17Q13304 367 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 ANKS6Q68DC2 871 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 IGFL4Q6B9Z1 124 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 PPP4R3AQ6IN85 833 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 PGM2L1Q6PCE3 622 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 HAUS6Q7Z4H7 955 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 CMTM8Q8IZV2 173 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 PQLC1Q8N2U9 271 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 CCDC148Q8NFR7 591 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 CLIP3Q96DZ5 547 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 SORCS2Q96PQ0 1159 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 NUSAP1Q9BXS6 441 aaKnown RBP6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 SLC26A6Q9BXS9 759 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 RNF26Q9BY78 433 aaPredicted RBP6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 PTPRHQ9HD43 1115 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 MKS1Q9NXB0 559 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 TPCN1Q9ULQ1 816 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 DNM3Q9UQ16 869 aa6.84□□□□□ -1.31
PPP4R1-216ENST00000580283 MYH10P35580 1976 aa6.84□□□□□ -1.32
PPP4R1-216ENST00000580283 TP53BP1Q12888 1972 aaPredicted RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 MTMR11A4FU01 709 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 USO1O60763 962 aaKnown RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 DTNBO60941 627 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 ENDOD1O94919 500 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 LARGE1O95461 756 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 KCNE1P15382 129 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 ATF6P18850 670 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 AGXTP21549 392 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 ITPKBP27987 946 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 NMT1P30419 496 aaKnown RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 APOBEC3AP31941 199 aaPredicted RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 OSTNP61366 133 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 FHL2Q14192 279 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 FBXO43Q4G163 708 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 FNDC7Q5VTL7 733 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 ANO7Q6IWH7 933 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 ZNF280DQ6N043 979 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 TOGARAM2Q6ZUX3 1019 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 Q6ZVL8 140 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 GPRIN1Q7Z2K8 1008 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 MINDY1Q8N5J2 469 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 CCDC33Q8N5R6 958 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 DEFB119Q8N690 84 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 TSTD1Q8NFU3 115 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 OR10H5Q8NGA6 315 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 ZFP28Q8NHY6 868 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 NEU4Q8WWR8 484 aaPredicted RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 CNOT6LQ96LI5 555 aaKnown RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 SLC2A13Q96QE2 648 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 SLC22A12Q96S37 553 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 DCLRE1CQ96SD1 692 aaKnown RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 KIFC3Q9BVG8 833 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 LINC00597Q9H2U6 94 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 PRORYQ9H606 182 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 ECT2Q9H8V3 914 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 LANCL2Q9NS86 450 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 GJB4Q9NTQ9 266 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 NAP1L2Q9ULW6 460 aaPredicted RBP6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 KCNJ14Q9UNX9 436 aa6.83□□□□□ -1.32
PPP4R1-216ENST00000580283 CCDC196A0A1B0GTZ2 297 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 TRABD2BA6NFA1 517 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 FAM171A2A8MVW0 826 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 CCNT1O60563 726 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 SERPINF2P08697 491 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 HMGA1P17096 107 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 PDIA3P30101 505 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 RPL9P32969 192 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 OPRD1P41143 372 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ALDH1A3P47895 512 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ITKQ08881 620 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 KLF10Q13118 480 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ACAP2Q15057 778 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 PTPAQ15257 358 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 MAPK6Q16659 721 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 BMT2Q1RMZ1 405 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 DCAF4L1Q3SXM0 396 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ATF7IP2Q5U623 682 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 EMC10Q5UCC4 262 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 TXNDC8Q6A555 127 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 DRICH1Q6PGQ1 229 aaPredicted RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 LPCAT2Q7L5N7 544 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ZNF572Q7Z3I7 529 aaPredicted RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 MAB21L3Q8N8X9 362 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 FBXO18Q8NFZ0 1043 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 LRRC15Q8TF66 581 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms