RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SLC25A11Q02978 314 aaKnown RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 BCL2L1Q07817 233 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 IL10RBQ08334 325 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 MMRN1Q13201 1228 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 DPYSQ14117 519 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 RFTN1Q14699 578 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 LBRQ14739 615 aaKnown RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ANKRD20A8PQ5CZ79 823 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 PIP5KL1Q5T9C9 394 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TMCO4Q5TGY1 634 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 MARC1Q5VT66 337 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TXNRD3NBQ6F5E7 133 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 NAPEPLDQ6IQ20 393 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ERAP2Q6P179 960 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 CYP4V2Q6ZWL3 525 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 SRLQ86TD4 932 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TRIM69Q86WT6 500 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 HORMAD1Q86X24 394 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 GAS2L3Q86XJ1 694 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 LRRC49Q8IUZ0 686 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 RHOT1Q8IXI2 618 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TC2NQ8N9U0 490 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TSEN2Q8NCE0 465 aaKnown RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 DEFB124Q8NES8 71 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 C1orf216Q8TAB5 229 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 CXorf40AQ8TE69 158 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 RHBDD1Q8TEB9 315 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 PDCD6IPQ8WUM4 868 aaKnown RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 RFFLQ8WZ73 363 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF641Q96N77 438 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF830Q96NB3 372 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF599Q96NL3 588 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 C1QTNF7Q9BXJ2 289 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 SLC17A9Q9BYT1 436 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 SUV39H2Q9H5I1 410 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ATP13A3Q9H7F0 1226 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 GDF3Q9NR23 364 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TM7SF3Q9NS93 570 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ETNK2Q9NVF9 386 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 KLHL11Q9NVR0 708 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 RCOR3Q9P2K3 495 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 INTUQ9ULD6 942 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 NEU3Q9UQ49 428 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 MFHAS1Q9Y4C4 1052 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TTLL3Q9Y4R7 772 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 PCDHA13Q9Y5I0 950 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 EPN1Q9Y6I3 576 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 CHD8Q9HCK8 2581 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 H0Y8X5 98 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 FPGTO14772 594 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 INSIG1O15503 277 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 LATO43561 262 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 SH3BP5O60239 455 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 LZTS3O60299 673 aaPredicted RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 MMP20O60882 483 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 PIGNO95427 931 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 KRT1P04264 644 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 PTMAP06454 111 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 ITGAVP06756 1048 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CD48P09326 243 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 KRT10P13645 584 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 TIMP2P16035 220 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 MX2P20592 715 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CSRP1P21291 193 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 NFKBIAP25963 317 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 MMP13P45452 471 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 SUOXP51687 545 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 TAS2R38P59533 333 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 TAS2R40P59535 323 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 IL9RQ01113 521 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 NSUN2Q08J23 767 aaKnown RBP eCLIP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 SLC10A7Q0GE19 358 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 OVGP1Q12889 678 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 HNRNPDQ14103 355 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 DPYSL3Q14195 570 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 TRIP6Q15654 476 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF284Q2VY69 593 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 INAVAQ3KP66 663 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 HS1BP3Q53T59 392 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CCDC157Q569K6 752 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 LRRC73Q5JTD7 316 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CCDC181Q5TID7 509 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 AFMIDQ63HM1 303 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 SEL1L3Q68CR1 1132 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 KIAA1161Q6NSJ0 714 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 ARHGAP36Q6ZRI8 547 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 PARS2Q7L3T8 475 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 DAAM2Q86T65 1068 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 KIAA1328Q86T90 577 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CPNE8Q86YQ8 564 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 RFX6Q8HWS3 928 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CAMK1DQ8IU85 385 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CCDC50Q8IVM0 306 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 TXLNBQ8N3L3 684 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 NPWQ8N729 165 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 MFSD2AQ8NA29 543 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 RNF25Q96BH1 459 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms