RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 CSNK1DP48730 415 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 PFN3P60673 137 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 YPEL5P62699 121 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 SERINC3Q13530 473 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 AGERQ15109 404 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 POM121L1PQ3SYA9 428 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 PRAMEF14Q5SWL7 426 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 PLEKHA7Q6IQ23 1121 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 DCBLD1Q8N8Z6 715 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 OR13H1Q8NG92 308 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 BAP1Q92560 729 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 GRAMD1AQ96CP6 724 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 BMFQ96LC9 184 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 PCMTD1Q96MG8 357 aaPredicted RBP14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 KLF6Q99612 283 aaPredicted RBP14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 C1QTNF7Q9BXJ2 289 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 DNAI1Q9UI46 699 aa14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 FCF1Q9Y324 198 aaKnown RBP14.72□□□□□ -0.05
SMARCE1-213ENST00000578044 TSPAN11A1L157 253 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 CFAP69A5D8W1 941 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 RNF103O00237 685 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 FPGTO14772 594 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 CCP110O43303 1012 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 GIMD1P0DJR0 217 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 JUPP14923 745 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 PRLRP16471 622 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 HCAR3P49019 387 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 NUMBP49757 651 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 DUSP3P51452 185 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 TYRO3Q06418 890 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 SGCGQ13326 291 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 ACAP1Q15027 740 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 RAB6CQ53S08 254 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 FIGNQ5HY92 759 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 SEL1L3Q68CR1 1132 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 Q6ZSR6 202 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 PARGQ86W56 976 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 SLC22A18ASQ8N1D0 253 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 SDR16C5Q8N3Y7 309 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 BTN2A2Q8WVV5 523 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 SPOCK2Q92563 424 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 ZNF641Q96N77 438 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 RAB6CQ9H0N0 254 aa14.71□□□□□ -0.05
SMARCE1-213ENST00000578044 RP1P56715 2156 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 H3BM21 787 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 TRIM38O00635 465 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 SIGLEC6O43699 453 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 TMCC1O94876 653 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 IGSF6O95976 241 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 PAK4O96013 591 aaPredicted RBP14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 DNA2P51530 1060 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 RPL7AP62424 266 aaKnown RBP14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 ELP6Q0PNE2 266 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 MAMLD1Q13495 774 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 PTK2BQ14289 1009 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 FGL2Q14314 439 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 FILIP1LQ4L180 1135 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 TMCO4Q5TGY1 634 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 DCUN1D2Q6PH85 259 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 GDPD4Q6W3E5 623 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 CENPTQ96BT3 561 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 MCEEQ96PE7 176 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 TUBGCP5Q96RT8 1024 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 TM6SF2Q9BZW4 377 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 ZDHHC6Q9H6R6 413 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 LRRC19Q9H756 370 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 SALL4Q9UJQ4 1053 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 LHX6Q9UPM6 363 aa14.7□□□□□ -0.06
SMARCE1-213ENST00000578044 POM121BA6NF01 834 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 GOLGA8CPA6NN73 597 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 RASA4BC9J798 803 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 SPINT1O43278 529 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 RASA4O43374 803 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 BUB1O43683 1085 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 MYBL1P10243 752 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 ABL2P42684 1182 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 PEX5P50542 639 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 NSUN2Q08J23 767 aaKnown RBP eCLIP14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 DNAJC3Q13217 504 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 FZD2Q14332 565 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 RFTN1Q14699 578 aaPredicted RBP14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 HES3Q5TGS1 186 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 CDCP2Q5VXM1 449 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 AFMIDQ63HM1 303 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 ZCCHC8Q6NZY4 707 aaKnown RBP14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 BRAT1Q6PJG6 821 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 TMC6Q7Z403 805 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 DNAAF5Q86Y56 855 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 MDM1Q8TC05 714 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 IQCDQ96DY2 449 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 TRIM11Q96F44 468 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 PDFQ9HBH1 243 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 SMG1Q96Q15 3661 aaKnown RBP14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 LRRK1Q38SD2 2015 aa14.69□□□□□ -0.06
SMARCE1-213ENST00000578044 A0A1B0GTH6 734 aa14.68□□□□□ -0.06
SMARCE1-213ENST00000578044 TMEM191CA6NGB0 347 aa14.68□□□□□ -0.06
SMARCE1-213ENST00000578044 TMEM110-MUSTN1A8MSY1 372 aa14.68□□□□□ -0.06
SMARCE1-213ENST00000578044 KRIT1O00522 736 aa14.68□□□□□ -0.06
SMARCE1-213ENST00000578044 PRAMEF11O60813 436 aa14.68□□□□□ -0.06
SMARCE1-213ENST00000578044 GJB6O95452 261 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms