RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 PECAM1P16284 738 aaPredicted RBP10.37□□□□□ -0.75
SS18-207ENST00000577636 GOT1P17174 413 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 IL4RP24394 825 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 ECHS1P30084 290 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 ITGA8P53708 1063 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 PMS2P54278 862 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 GRIK2Q13002 908 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 MORF4L2Q15014 288 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 CCDC157Q569K6 752 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 WDR45BQ5MNZ6 344 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 OTUD1Q5VV17 481 aaPredicted RBP10.37□□□□□ -0.75
SS18-207ENST00000577636 ZDHHC24Q6UX98 284 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 PPP1R21Q6ZMI0 780 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 BHLHA9Q7RTU4 235 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 TAC4Q86UU9 113 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 PPIL6Q8IXY8 311 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 PQLC3Q8N755 202 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 KIAA1958Q8N8K9 716 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 FAM71DQ8N9W8 422 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 KCNV2Q8TDN2 545 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 OVCA2Q8WZ82 227 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
SS18-207ENST00000577636 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
SS18-207ENST00000577636 XPO6Q96QU8 1125 aaKnown RBP10.37□□□□□ -0.75
SS18-207ENST00000577636 HAPLN3Q96S86 360 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 BBS2Q9BXC9 721 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 BRD8Q9H0E9 1235 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 OSBPL2Q9H1P3 480 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 NEUROG2Q9H2A3 272 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 IL21RQ9HBE5 538 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 IL37Q9NZH6 218 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 GMIPQ9P107 970 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 PAK5Q9P286 719 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 OR12D3Q9UGF7 316 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 SUSD2Q9UGT4 822 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 SHOC2Q9UQ13 582 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 AKAP13Q12802 2813 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 ZFYVE26Q68DK2 2539 aa10.37□□□□□ -0.75
SS18-207ENST00000577636 MYO18AQ92614 2054 aaKnown RBP10.37□□□□□ -0.75
SS18-207ENST00000577636 FASNP49327 2511 aaKnown RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 FAM92AA1XBS5 289 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 PRRT4C9JH25 899 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 FGF10O15520 208 aaPredicted RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 GJB3O75712 270 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 TBX18O95935 607 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 MYZAPP0CAP1 466 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 RARGP13631 454 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 TYRP14679 529 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 MX2P20592 715 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 AMPD1P23109 780 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 CD6P30203 668 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 HSD17B3P37058 310 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 TBX4P57082 545 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 PITX1P78337 314 aaPredicted RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 COG7P83436 770 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 CYP4F3Q08477 520 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 SLC45A4Q5BKX6 768 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 C10orf120Q5SQS8 335 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 MSANTD2Q6P1R3 559 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 NPNTQ6UXI9 565 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 LRRC31Q6UY01 552 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 CENPUQ71F23 418 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 SCD5Q86SK9 330 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 HOOK3Q86VS8 718 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 PYROXD2Q8N2H3 581 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 ZCCHC9Q8N567 271 aaKnown RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 ATP6V0D2Q8N8Y2 350 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 TFB1MQ8WVM0 346 aaKnown RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 MRGPRX1Q96LB2 322 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 BBC3Q96PG8 261 aaPredicted RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 CCDC77Q9BR77 488 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 GPR174Q9BXC1 333 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 FRMD8Q9BZ67 464 aaPredicted RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 KLC2Q9H0B6 622 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 PABPC3Q9H361 631 aaKnown RBP10.36□□□□□ -0.75
SS18-207ENST00000577636 GAREM1Q9H706 876 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 CATSPERBQ9H7T0 1116 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 PLK2Q9NYY3 685 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 PLAAQ9Y263 795 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 TLR6Q9Y2C9 796 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 STARD13Q9Y3M8 1113 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 NEU2Q9Y3R4 380 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 DMXL2Q8TDJ6 3036 aa10.36□□□□□ -0.75
SS18-207ENST00000577636 A0A1B0GTW7 788 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 E7EVH7 732 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 MTSS1O43312 755 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 EPHB2P29323 1055 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 OAS2P29728 719 aaKnown RBP10.35□□□□□ -0.75
SS18-207ENST00000577636 GGCXP38435 758 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 DGKGP49619 791 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 ARL4CP56559 192 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 BASP1P80723 227 aaKnown RBP10.35□□□□□ -0.75
SS18-207ENST00000577636 EFEMP1Q12805 493 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 PAFAH1B3Q15102 231 aaKnown RBP10.35□□□□□ -0.75
SS18-207ENST00000577636 TRIP4Q15650 581 aaPredicted RBP10.35□□□□□ -0.75
SS18-207ENST00000577636 NCBP2-AS2Q69YL0 99 aa10.35□□□□□ -0.75
SS18-207ENST00000577636 HIBCHQ6NVY1 386 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms