RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 GOLGA4Q13439 2230 aaKnown RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 CHD6Q8TD26 2715 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 WASH4PA8MWX3 477 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 TRIM38O00635 465 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 ENC1O14682 589 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 DFNA5O60443 496 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 LRCH4O75427 683 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 GSRP00390 522 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 PRKCGP05129 697 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 RXRGP48443 463 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 ARRB1P49407 418 aaPredicted RBP12.06□□□□□ -0.48
LITAF-219ENST00000576334 PAPOLAP51003 745 aaKnown RBP12.06□□□□□ -0.48
LITAF-219ENST00000576334 UBASH3AP57075 661 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 RHOAP61586 193 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 SNRPD1P62314 119 aaKnown RBP12.06□□□□□ -0.48
LITAF-219ENST00000576334 SMTNL2Q2TAL5 461 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 ZNF805Q5CZA5 627 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 PPP6R3Q5H9R7 873 aaPredicted RBP12.06□□□□□ -0.48
LITAF-219ENST00000576334 ERMARDQ5T6L9 678 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 NEK5Q6P3R8 708 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 Q6ZSR6 202 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 PTAR1Q7Z6K3 402 aaPredicted RBP12.06□□□□□ -0.48
LITAF-219ENST00000576334 ARHGAP12Q8IWW6 846 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 UMODL1-AS1Q8N2C9 162 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 MDM1Q8TC05 714 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 ARHGEF26Q96DR7 871 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 NSMCE3Q96MG7 304 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.06□□□□□ -0.48
LITAF-219ENST00000576334 ISCUQ9H1K1 167 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 CATSPERBQ9H7T0 1116 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 ERVMER34-1Q9H9K5 563 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 PDFQ9HBH1 243 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 ETNK2Q9NVF9 386 aa12.06□□□□□ -0.48
LITAF-219ENST00000576334 COL5A1P20908 1838 aaPredicted RBP12.06□□□□□ -0.48
LITAF-219ENST00000576334 ANKRD36A6QL64 1941 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 A0A087X0T9 212 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 TTC24A2A3L6 582 aaPredicted RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 SRRM3A6NNA2 597 aaPredicted RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 EEF2KO00418 725 aaKnown RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 FFAR2O15552 330 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 BUB1BO60566 1050 aaPredicted RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 MMP20O60882 483 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 POP4O95707 220 aaKnown RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 FAM228BP0C875 321 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 GZMAP12544 262 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 TIMP2P16035 220 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 ERCC2P18074 760 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 AKT2P31751 481 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 AIF1P55008 147 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 YBEYP58557 167 aaPredicted RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 TDRD12Q587J7 1177 aaKnown RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 GDPD4Q6W3E5 623 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 TMPRSS7Q7RTY8 843 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 ABI3BPQ7Z7G0 1075 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 TTC7BQ86TV6 843 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 IQCHQ86VS3 1027 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 ZSWIM9Q86XI8 627 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 FEM1CQ96JP0 617 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 GDAP1L1Q96MZ0 367 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 KLF6Q99612 283 aaPredicted RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 WRAP53Q9BUR4 548 aaKnown RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 THAP2Q9H0W7 228 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 RETREG1Q9H6L5 497 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 ZWILCHQ9H900 591 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 CWC15Q9P013 229 aaKnown RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 KLF15Q9UIH9 416 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 PNMA8BQ9ULN7 279 aaPredicted RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 TPX2Q9ULW0 747 aaKnown RBP12.05□□□□□ -0.48
LITAF-219ENST00000576334 COQ6Q9Y2Z9 468 aa12.05□□□□□ -0.48
LITAF-219ENST00000576334 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 MYLKQ15746 1914 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 NEMP1O14524 444 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 AREL1O15033 823 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 MUSKO15146 869 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 FGF10O15520 208 aaPredicted RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 SIGLEC6O43699 453 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 AP1G1O43747 822 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 PRPSAP2O60256 369 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 PRAMEF11O60813 436 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 NEBLO76041 1014 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 IGSF6O95976 241 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 GYPCP04921 128 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 GIMD1P0DJR0 217 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 DGKAP23743 735 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 NUDT1P36639 197 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 ACADVLP49748 655 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 GEMIN4P57678 1058 aaKnown RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 RPS21P63220 83 aaKnown RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 FZD2Q14332 565 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 NFKBIBQ15653 356 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 PARP15Q460N3 678 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 INO80DQ53TQ3 878 aaPredicted RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 FIGNQ5HY92 759 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 AFMIDQ63HM1 303 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 KIAA1161Q6NSJ0 714 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 RFX8Q6ZV50 586 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 CAMK1DQ8IU85 385 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms