RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 IHHQ14623 411 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 HECTD3Q5T447 861 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 TMCO4Q5TGY1 634 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 NEPROQ6NW34 567 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 C2CD4AQ8NCU7 369 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 ARRDC2Q8TBH0 407 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 PTCD3Q96EY7 689 aaKnown RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 SORT1Q99523 831 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 SEMA3CQ99985 751 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 CLSTN3Q9BQT9 956 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 AFF4Q9UHB7 1163 aaKnown RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 A0A0D9SEW6 157 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 TK2O00142 265 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 COCHO43405 550 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 SIN3BO75182 1162 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 SEC24AO95486 1093 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 APOA4P06727 396 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 ESRRAP11474 423 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 STMN1P16949 149 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 ARRB2P32121 409 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 RAB10P61026 200 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 KRT72Q14CN4 511 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 TAF12Q16514 161 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 SIRPB2Q5JXA9 342 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 TSTD2Q5T7W7 516 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 LONP2Q86WA8 852 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 DENND1CQ8IV53 801 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 RNF168Q8IYW5 571 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 GPATCH11Q8N954 259 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF461Q8TAF7 563 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 OVCA2Q8WZ82 227 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 RANBP9Q96S59 729 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 ACE2Q9BYF1 805 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 CYP4F11Q9HBI6 524 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 MID2Q9UJV3 735 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 FBXO5Q9UKT4 447 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 ZFP37Q9Y6Q3 630 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 GJB3O75712 270 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 GLRBP48167 497 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 CD151P48509 253 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 ALDH18A1P54886 795 aaKnown RBP14.18□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF460Q14592 562 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 ARMC3Q5W041 872 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 IL31Q6EBC2 164 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 ATG14Q6ZNE5 492 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 GABPB2Q8TAK5 448 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-208ENST00000574755 CALML6Q8TD86 181 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 KCTD4Q8WVF5 259 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 IFT43Q96FT9 208 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 ELMO2Q96JJ3 720 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 SCYL1Q96KG9 808 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 C1QTNF1Q9BXJ1 281 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 ACOT9Q9Y305 439 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 CHD5Q8TDI0 1954 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 TRIM13O60858 407 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 HMGA1P17096 107 aaKnown RBP14.18□□□□□ -0.14
VPS33B-208ENST00000574755 POLD2P49005 469 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 C5orf22Q49AR2 442 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 RABGAP1LQ5R372 815 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 FAM91A1Q658Y4 838 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 CNKSR3Q6P9H4 555 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 LCA5Q86VQ0 697 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 CEP97Q8IW35 865 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 MFSD6LQ8IWD5 586 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 TADA1Q96BN2 335 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 BTBD10Q9BSF8 475 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 PNPOQ9NVS9 261 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 TRPM5Q9NZQ8 1165 aa14.18□□□□□ -0.14
VPS33B-208ENST00000574755 RUVBL2Q9Y230 463 aaKnown RBP14.18□□□□□ -0.14
VPS33B-208ENST00000574755 MUSKO15146 869 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 HSPA4LO95757 839 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 SOD2P04179 222 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 ATP5BP06576 529 aaKnown RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 SLC8A1P32418 973 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 ALDH1A3P47895 512 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 SLC12A2P55011 1212 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 RPS24P62847 133 aaKnown RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 GNA12Q03113 381 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 FAM117BQ6P1L5 589 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 KLHDC10Q6PID8 442 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 NAPRTQ6XQN6 538 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 KIAA0408Q6ZU52 694 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 CENPLQ8N0S6 344 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 OR7D4Q8NG98 312 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 OR13J1Q8NGT2 312 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 OR6Y1Q8NGX8 325 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 TMEM169Q96HH4 297 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 TOX2Q96NM4 488 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 MAGEH1Q9H213 219 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 FAM96AQ9H5X1 160 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 STN1Q9H668 368 aaKnown RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 PDFQ9HBH1 243 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 PCDHB12Q9Y5F1 795 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 LOC285095A0A1B0GVY8 99 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 AURKAO14965 403 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 GYG2O15488 501 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 ABLIM3O94929 683 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms