RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ASAH2Q9NR71 780 aa28.77■■■□□ 2.2
CTDNEP1-210ENST00000574322 IL1RAPL1Q9NZN1 696 aa28.77■■■□□ 2.2
CTDNEP1-210ENST00000574322 PLLPQ9Y342 182 aa28.77■■■□□ 2.2
CTDNEP1-210ENST00000574322 CDH23Q9H251 3354 aa28.76■■■□□ 2.2
CTDNEP1-210ENST00000574322 TRAV19A0A0A6YYK7 116 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 FGF19O95750 216 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 SPRP35270 261 aaPredicted RBP28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 CHRNA4P43681 627 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 CAMK1Q14012 370 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 PCSK7Q16549 785 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 PPM1LQ5SGD2 360 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 STXBP5Q5T5C0 1151 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 CACNA2D3Q8IZS8 1091 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 MAB21L3Q8N8X9 362 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 TMA16Q96EY4 203 aaKnown RBP28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 SPON2Q9BUD6 331 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 LMAN2LQ9H0V9 348 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 ATXN3LQ9H3M9 355 aa28.76■■■□□ 2.19
CTDNEP1-210ENST00000574322 HEATR9A2RTY3 570 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 SIN3BO75182 1162 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 ALDOAP04075 364 aaKnown RBP28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 CES1P23141 567 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 ARCN1P48444 511 aaKnown RBP28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 LIMK2P53671 638 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 GRIN2CQ14957 1233 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 C6orf89Q6UWU4 347 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 MICALCLQ6ZW33 695 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 FGFR1OP2Q9NVK5 253 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 MYLKQ15746 1914 aa28.75■■■□□ 2.19
CTDNEP1-210ENST00000574322 TYW5A2RUC4 315 aaKnown RBP28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 TBL1XO60907 577 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 PAPSS2O95340 614 aaPredicted RBP28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 CKMP06732 381 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 ATXN1LP0C7T5 689 aaKnown RBP28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 MAGEA12P43365 314 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 RNF219Q5W0B1 726 aaPredicted RBP28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 KIAA0930Q6ICG6 404 aaPredicted RBP28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 CDHR3Q6ZTQ4 885 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 STRA8Q7Z7C7 330 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 GRAMD1AQ96CP6 724 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 FAM161BQ96MY7 647 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 AGAP2Q99490 1192 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 ATXN2Q99700 1313 aaKnown RBP28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 LUC7L3O95232 432 aaKnown RBP28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 CR2P20023 1033 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 HOXA9P31269 272 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 IRS1P35568 1242 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 MPP7Q5T2T1 576 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 SLC22A17Q8WUG5 538 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 CORO1BQ9BR76 489 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 OR51B4Q9Y5P0 310 aa28.74■■■□□ 2.19
CTDNEP1-210ENST00000574322 A0A1W2PRU2 124 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 SOBPA7XYQ1 873 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 SNX3O60493 162 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 ZMPSTE24O75844 475 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 SERPINF2P08697 491 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 PAMP19021 973 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 HLA-DPA1P20036 260 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 DDX6P26196 483 aaKnown RBP eCLIP28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 RNF43Q68DV7 783 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 NDUFAF2Q8N183 169 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 LRRC8CQ8TDW0 803 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 FAM111AQ96PZ2 611 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 CINPQ9BW66 212 aaPredicted RBP28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 SLC46A2Q9BY10 475 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 IQCGQ9H095 443 aaKnown RBP28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 ARHGAP26Q9UNA1 814 aa28.73■■■□□ 2.19
CTDNEP1-210ENST00000574322 CCL16O15467 120 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 TIMM44O43615 452 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 MYL4P12829 197 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 GLDCP23378 1020 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 ARNTP27540 789 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 CDK18Q07002 472 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 ITIH4Q14624 930 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 SIRPB2Q5JXA9 342 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 PDE12Q6L8Q7 609 aaKnown RBP28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 ESRP1Q6NXG1 681 aaKnown RBP28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 NLRP9Q7RTR0 991 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 KDELC2Q7Z4H8 507 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 SLC25A41Q8N5S1 370 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 CCDC197Q8NCU1 140 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 ZNF75CPQ92670 426 aaPredicted RBP28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 IARS2Q9NSE4 1012 aaKnown RBP28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 CFAP97Q9P2B7 532 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 MROH6A6NGR9 719 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 H0Y626 953 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 NRG2O14511 850 aaPredicted RBP28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 FGF1P05230 155 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 HADHAP40939 763 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 CYTH1Q15438 398 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 GPR153Q6NV75 609 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 ELAC2Q9BQ52 826 aaKnown RBP28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 FEM1AQ9BSK4 669 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 MUC3BQ9H195 1237 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 C12orf65Q9H3J6 166 aaKnown RBP28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 PCMTD2Q9NV79 361 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 SH3BP1Q9Y3L3 701 aa28.72■■■□□ 2.19
CTDNEP1-210ENST00000574322 TTC24A2A3L6 582 aaPredicted RBP28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 TPP1O14773 563 aa28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 ARF5P84085 180 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms