RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 FBXL19Q6PCT2 694 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 GDPD4Q6W3E5 623 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 ERN2Q76MJ5 926 aaKnown RBP17.51■□□□□ 0.39
CLDN7-207ENST00000574070 VSIG1Q86XK7 387 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 LRRC49Q8IUZ0 686 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 KATNAL2Q8IYT4 538 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 RCOR2Q8IZ40 523 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 TSEN2Q8NCE0 465 aaKnown RBP17.51■□□□□ 0.39
CLDN7-207ENST00000574070 CCNYQ8ND76 341 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 RBM41Q96IZ5 413 aaKnown RBP17.51■□□□□ 0.39
CLDN7-207ENST00000574070 KLHL32Q96NJ5 620 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 TMEM74BQ9NUR3 256 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 PILRBQ9UKJ0 227 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 AMFRQ9UKV5 643 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 GUCA1BQ9UMX6 200 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 CEP192Q8TEP8 1941 aa17.51■□□□□ 0.39
CLDN7-207ENST00000574070 CEP295Q9C0D2 2601 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 GRID2IPA4D2P6 1211 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 C3orf70A6NLC5 250 aaPredicted RBP17.5■□□□□ 0.39
CLDN7-207ENST00000574070 ZNF487B1APH4 448 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 RNF103O00237 685 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 INSIG1O15503 277 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 CFIP05156 583 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 CCDC175P0C221 793 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 ZNF806P0C7X5 589 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 ITGB7P26010 798 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 GARSP41250 739 aaKnown RBP17.5■□□□□ 0.39
CLDN7-207ENST00000574070 MARCKSL1P49006 195 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 NEK3P51956 506 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 SLC10A7Q0GE19 358 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 TFDP2Q14188 446 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 SF3A2Q15428 464 aaKnown RBP17.5■□□□□ 0.39
CLDN7-207ENST00000574070 TRIM61Q5EBN2 209 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 PIP5KL1Q5T9C9 394 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 MARC1Q5VT66 337 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 AGBL4Q5VU57 503 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 TIGD7Q6NT04 549 aaPredicted RBP17.5■□□□□ 0.39
CLDN7-207ENST00000574070 SPOCD1Q6ZMY3 1216 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 PRR23CQ6ZRP0 262 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 PEX26Q7Z412 305 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 NETO1Q8TDF5 533 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 KRT35Q92764 455 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 BIRC7Q96CA5 298 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 SUSD2Q9UGT4 822 aa17.5■□□□□ 0.39
CLDN7-207ENST00000574070 EIF2B4Q9UI10 523 aaKnown RBP17.5■□□□□ 0.39
CLDN7-207ENST00000574070 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.5■□□□□ 0.39
CLDN7-207ENST00000574070 C16orf96A6NNT2 1141 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PATE3B3GLJ2 98 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PLRG1O43660 514 aaKnown RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PCDH8O95206 1070 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PIGNO95427 931 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 KRT10P13645 584 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 XPAP23025 273 aaPredicted RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 CTNNA1P35221 906 aaKnown RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 MMP13P45452 471 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 SCNN1BP51168 640 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 CCZ1BP86790 482 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 CCZ1P86791 482 aaPredicted RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 ITKQ08881 620 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 GRM3Q14832 879 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 DUOXA1Q1HG43 343 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 ZNF805Q5CZA5 627 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PPM1JQ5JR12 505 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PLA2G2CQ5R387 149 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 SLC9A4Q6AI14 798 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 TCEAL6Q6IPX3 200 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PARS2Q7L3T8 475 aaKnown RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 RABEPKQ7Z6M1 372 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 SRLQ86TD4 932 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 ZCCHC9Q8N567 271 aaKnown RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 PLD5Q8N7P1 536 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 EXD1Q8NHP7 514 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 CEP76Q8TAP6 659 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 LRRN4Q8WUT4 740 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 TCEAL3Q969E4 200 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 NUSAP1Q9BXS6 441 aaKnown RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 HDAC8Q9BY41 377 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 KDM4CQ9H3R0 1056 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 DTLQ9NZJ0 730 aa17.49■□□□□ 0.39
CLDN7-207ENST00000574070 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.49■□□□□ 0.39
CLDN7-207ENST00000574070 CCDC66A2RUB6 948 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 FOXD2O60548 495 aaPredicted RBP17.48■□□□□ 0.39
CLDN7-207ENST00000574070 CST8O60676 142 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 ADRB3P13945 408 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 CCNCP24863 283 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 CTNNA2P26232 953 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 MAT2AP31153 395 aaKnown RBP17.48■□□□□ 0.39
CLDN7-207ENST00000574070 HOXD12P35452 270 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
CLDN7-207ENST00000574070 CETN2P41208 172 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 CDKN2BP42772 138 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 RGRP47804 291 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 RWDD2BP57060 319 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 TFDP3Q5H9I0 405 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 CCDC181Q5TID7 509 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 NPNTQ6UXI9 565 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 PRPF39Q86UA1 669 aaKnown RBP17.48■□□□□ 0.39
CLDN7-207ENST00000574070 CCDC13Q8IYE1 715 aa17.48■□□□□ 0.39
CLDN7-207ENST00000574070 RNF10Q8N5U6 811 aaKnown RBP17.48■□□□□ 0.39
CLDN7-207ENST00000574070 DNASE2BQ8WZ79 361 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms