RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NUMBP49757 651 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 ZNF131P52739 623 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 PPP2R2AP63151 447 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 TLE4Q04727 773 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 CHAF1BQ13112 559 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 DUOXA2Q1HG44 320 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 PLEKHN1Q494U1 663 aaPredicted RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 VWA2Q5GFL6 755 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 TTC38Q5R3I4 469 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 FAM46CQ5VWP2 391 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 CPZQ66K79 652 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 SEL1L3Q68CR1 1132 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 ANKS6Q68DC2 871 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 KYAT3Q6YP21 454 aaKnown RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 ACOT1Q86TX2 421 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 MFN1Q8IWA4 741 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 PHC2Q8IXK0 858 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 NXPE1Q8N323 547 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 ITLN2Q8WWU7 325 aaPredicted RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 NRGNQ92686 78 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 PLD4Q96BZ4 506 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 RPL10LQ96L21 214 aaKnown RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 CDK5RAP1Q96SZ6 601 aaKnown RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 EFHD1Q9BUP0 239 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 SLC25A23Q9BV35 468 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 SRA1Q9HD15 236 aaKnown RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 MLXIPLQ9NP71 852 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 OCIAD1Q9NX40 245 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 SLC39A1Q9NY26 324 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 CLIC5Q9NZA1 410 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 APOBEC3BQ9UH17 382 aaKnown RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 ADAM21Q9UKJ8 722 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 ZFR2Q9UPR6 939 aaKnown RBP7.07□□□□□ -1.28
CHD3-213ENST00000571249 NAALADL1Q9UQQ1 740 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 POLHQ9Y253 713 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 NTNG1Q9Y2I2 539 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 KIF3AQ9Y496 699 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 CEP83Q9Y592 693 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 HS3ST3A1Q9Y663 406 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 ANK2Q01484 3957 aa7.07□□□□□ -1.28
CHD3-213ENST00000571249 ITIH6Q6UXX5 1313 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 TMEM229AB2RXF0 380 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 HHLA1C9JL84 531 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 LDHAP00338 332 aaKnown RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 ATF4P18848 351 aaPredicted RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 MAP4P27816 1152 aaKnown RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 ADORA2BP29275 332 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 RABIFP47224 123 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 STK19P49842 368 aaPredicted RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 CCL11P51671 97 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 ZNF445P59923 1031 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 ECT2LQ008S8 904 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 SEMA5AQ13591 1074 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 TRIM29Q14134 588 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 TRIP4Q15650 581 aaPredicted RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 IL17AQ16552 155 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 PITRM1Q5JRX3 1037 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 COX20Q5RI15 118 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 ADGRF1Q5T601 910 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 L1TD1Q5T7N2 865 aaKnown RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 RNF219Q5W0B1 726 aaPredicted RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 NEK5Q6P3R8 708 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 RFWD3Q6PCD5 774 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 MMS22LQ6ZRQ5 1243 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 PARS2Q7L3T8 475 aaKnown RBP7.06□□□□□ -1.28
CHD3-213ENST00000571249 TRAPPC11Q7Z392 1133 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 KDELC2Q7Z4H8 507 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 GPBP1Q86WP2 473 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 SFR1Q86XK3 245 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 PHACTR4Q8IZ21 702 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 PCDH19Q8TAB3 1148 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 FIBINQ8TAL6 211 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 TNIP3Q96KP6 325 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 SPAG5Q96R06 1193 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 SPSB2Q99619 263 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 CTRCQ99895 268 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 PCIF1Q9H4Z3 704 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 SMYD3Q9H7B4 428 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 MCCC2Q9HCC0 563 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 CHST11Q9NPF2 352 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 STOML2Q9UJZ1 356 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 VPS9D1Q9Y2B5 631 aa7.06□□□□□ -1.28
CHD3-213ENST00000571249 IGHV5-10-1A0A0J9YXX1 117 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 GOLGA6L7A0A1B0GV03 622 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 A6NCN8 305 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 C1QTNF3-AMACRE9PGA6 284 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 KCNN4O15554 427 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 B4GAT1O43505 415 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 PCDH8O95206 1070 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 MAP3K6O95382 1288 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 PAK4O96013 591 aaPredicted RBP7.05□□□□□ -1.28
CHD3-213ENST00000571249 KRT18P05783 430 aaKnown RBP7.05□□□□□ -1.28
CHD3-213ENST00000571249 SLFN14P0C7P3 912 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 FAM200BP0CF97 657 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 ZNF18P17022 549 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 NFKBIAP25963 317 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 VARSP26640 1264 aaKnown RBP7.05□□□□□ -1.28
CHD3-213ENST00000571249 KIF11P52732 1056 aa7.05□□□□□ -1.28
CHD3-213ENST00000571249 IST1P53990 364 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms