RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 PRLRP16471 622 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 ARHGAP25P42331 645 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 MAGEA1P43355 309 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 ZNF284Q2VY69 593 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 TMEM259Q4ZIN3 620 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 PPM1JQ5JR12 505 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 NCBP2-AS2Q69YL0 99 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 NAPEPLDQ6IQ20 393 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 HORMAD1Q86X24 394 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 CCDC170Q8IYT3 715 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 TSEN2Q8NCE0 465 aaKnown RBP13.59□□□□□ -0.23
RPAIN-207ENST00000570883 RAPGEF5Q92565 580 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 KLK6Q92876 244 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 SERAC1Q96JX3 654 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 KLHL32Q96NJ5 620 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 CALN1Q9BXU9 219 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 OSBPL1AQ9BXW6 950 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 TPX2Q9ULW0 747 aaKnown RBP13.59□□□□□ -0.23
RPAIN-207ENST00000570883 ITM2BQ9Y287 266 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 CA5BQ9Y2D0 317 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 ANKRD6Q9Y2G4 727 aa13.59□□□□□ -0.23
RPAIN-207ENST00000570883 REXO2Q9Y3B8 237 aaKnown RBP13.59□□□□□ -0.23
RPAIN-207ENST00000570883 C3orf70A6NLC5 250 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-207ENST00000570883 GIPC1O14908 333 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 AREL1O15033 823 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 VILLO15195 856 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 AP1G1O43747 822 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 BUB1BO60566 1050 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-207ENST00000570883 MAFKO60675 156 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 OPHN1O60890 802 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 CD59P13987 128 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 CDC25BP30305 580 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 CTSKP43235 329 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 HADHBP55084 474 aaKnown RBP13.58□□□□□ -0.24
RPAIN-207ENST00000570883 SLC10A7Q0GE19 358 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 FGL2Q14314 439 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 PDK2Q15119 407 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 TEAD4Q15561 434 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 HLA-BQ31612 363 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 ANKRD20A8PQ5CZ79 823 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 LRRC73Q5JTD7 316 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 NEK5Q6P3R8 708 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 FBXL19Q6PCT2 694 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 RAD9BQ6WBX8 426 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 PIP4P1Q86T03 277 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 PQLC3Q8N755 202 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 KCTD6Q8NC69 237 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 NSMCE3Q96MG7 304 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 PSKH2Q96QS6 385 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 CINPQ9BW66 212 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-207ENST00000570883 CPEB1Q9BZB8 566 aaKnown RBP13.58□□□□□ -0.24
RPAIN-207ENST00000570883 GOLPH3Q9H4A6 298 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 GAREM1Q9H706 876 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 AASDHPPTQ9NRN7 309 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 DMTF1Q9Y222 760 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 HYOU1Q9Y4L1 999 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 PCDHA13Q9Y5I0 950 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 CEP295Q9C0D2 2601 aa13.58□□□□□ -0.24
RPAIN-207ENST00000570883 LRP4O75096 1905 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 TSPAN11A1L157 253 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 RCCD1A6NED2 376 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 UPK3BL1B0FP48 263 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 UPK3BL2E5RIL1 263 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 KCNK3O14649 394 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 PCDH8O95206 1070 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 KCNK5O95279 499 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 NDUFA10O95299 355 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 ITIH2P19823 946 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 KDELR1P24390 212 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 CD38P28907 300 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 SERPINB6P35237 376 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 CYLC1P35663 651 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-207ENST00000570883 NUDT1P36639 197 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 CCDC15Q0P6D6 951 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 GALNT2Q10471 571 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 RFTN1Q14699 578 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-207ENST00000570883 PAFAH1B3Q15102 231 aaKnown RBP13.57□□□□□ -0.24
RPAIN-207ENST00000570883 SETMARQ53H47 684 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-207ENST00000570883 IL27RAQ6UWB1 636 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 ADAT2Q7Z6V5 191 aaKnown RBP13.57□□□□□ -0.24
RPAIN-207ENST00000570883 PRPF39Q86UA1 669 aaKnown RBP13.57□□□□□ -0.24
RPAIN-207ENST00000570883 ZSWIM9Q86XI8 627 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 TMTC1Q8IUR5 882 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 PGBD5Q8N414 524 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 ATPAF2Q8N5M1 289 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 TMEM145Q8NBT3 493 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 ZNF599Q96NL3 588 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 FZD3Q9NPG1 666 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 DKK3Q9UBP4 350 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 SALL4Q9UJQ4 1053 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 GOLGA4Q13439 2230 aaKnown RBP13.57□□□□□ -0.24
RPAIN-207ENST00000570883 CHD8Q9HCK8 2581 aa13.57□□□□□ -0.24
RPAIN-207ENST00000570883 TTC24A2A3L6 582 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-207ENST00000570883 LRRD1A4D1F6 860 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms