RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 DLG4P78352 724 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CBX1P83916 185 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 OTUD4Q01804 1114 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 PRKCEQ02156 737 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ALDH6A1Q02252 535 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 NCBP1Q09161 790 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 NPRL3Q12980 569 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 DRP2Q13474 957 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 THOC5Q13769 683 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 KCNC3Q14003 757 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ARHGAP19Q14CB8 494 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 VEPH1Q14D04 833 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 MTFR1Q15390 333 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TBCEQ15813 527 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 CNGA2Q16280 664 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 AANATQ16613 207 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 MAN2A1Q16706 1144 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 LY6KQ17RY6 165 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 KNOP1Q1ED39 458 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 MYLK3Q32MK0 819 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 UAP1L1Q3KQV9 507 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 KCTD21Q4G0X4 260 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 PPP6R3Q5H9R7 873 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 FSCBQ5H9T9 825 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 MORN1Q5T089 497 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 DEPDC1Q5TB30 811 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 GARNL3Q5VVW2 1013 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 BROXQ5VW32 411 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CDCP2Q5VXM1 449 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 NAIF1Q69YI7 327 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 TWF2Q6IBS0 349 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 KRT80Q6KB66 452 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 DPY19L2P1Q6NXN4 242 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CCDC62Q6P9F0 684 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 GJB7Q6PEY0 223 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TUBA3EQ6PEY2 450 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TRAT1Q6PIZ9 186 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CYP20A1Q6UW02 462 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 SLC36A4Q6YBV0 504 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ATG14Q6ZNE5 492 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 DENND5BQ6ZUT9 1274 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 BBS12Q6ZW61 710 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 OTOAQ7RTW8 1153 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 GPR149Q86SP6 731 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TLK2Q86UE8 772 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 NLRX1Q86UT6 975 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 OSTM1Q86WC4 334 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ZNF227Q86WZ6 799 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 REXO1L1PQ8IX06 675 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ZC3H3Q8IXZ2 948 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 SYCE1Q8N0S2 351 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 AGGF1Q8N302 714 aaeCLIP3.62□□□□□ -1.83
SMG6-208ENST00000570874 TMEM130Q8N3G9 435 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TXLNBQ8N3L3 684 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TDRD5Q8NAT2 981 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 LRRN4CLQ8ND94 238 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 C7orf57Q8NEG2 295 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 OR10H5Q8NGA6 315 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CLHC1Q8NHS4 586 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 PSMA8Q8TAA3 256 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 FAM71BQ8TC56 605 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 URGCPQ8TCY9 931 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 BCL7CQ8WUZ0 217 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 THAP4Q8WY91 577 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 PRCCQ92733 491 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 PMEPA1Q969W9 287 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TMIGD2Q96BF3 282 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ELMO3Q96BJ8 720 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 VWCEQ96DN2 955 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 KTI12Q96EK9 354 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 DTNBP1Q96EV8 351 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 SLC47A1Q96FL8 570 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ZNF668Q96K58 619 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 NECAB3Q96P71 396 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 NACC1Q96RE7 527 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 KCNK16Q96T55 309 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 MMP19Q99542 508 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CHP1Q99653 195 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CGRRF1Q99675 332 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 HNRNPABQ99729 332 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 PRRX2Q99811 253 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 HEPHQ9BQS7 1158 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 NUP85Q9BW27 656 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 STRA6Q9BX79 667 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TTYH3Q9C0H2 523 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CENPHQ9H3R5 247 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 RIBC2Q9H4K1 309 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 OPA3Q9H6K4 179 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 SYNDIG1Q9H7V2 258 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CLK4Q9HAZ1 481 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 RC3H2Q9HBD1 1191 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 ETNK1Q9HBU6 452 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 JPH1Q9HDC5 661 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 C11orf16Q9NQ32 467 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 XPNPEP1Q9NQW7 623 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 AGPAT3Q9NRZ7 376 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TM7SF3Q9NS93 570 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 SLC9A2Q9UBY0 812 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 BAIAP2L1Q9UHR4 511 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 IPO11Q9UI26 975 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms