RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 VPS28Q9UK41 221 aa7.32□□□□□ -1.24
SMG6-205ENST00000570659 GPR34Q9UPC5 381 aa7.32□□□□□ -1.24
SMG6-205ENST00000570659 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
SMG6-205ENST00000570659 PRRC2CQ9Y520 2896 aaKnown RBP7.32□□□□□ -1.24
SMG6-205ENST00000570659 MTORP42345 2549 aa7.32□□□□□ -1.24
SMG6-205ENST00000570659 RP1L1Q8IWN7 2480 aaPredicted RBP7.32□□□□□ -1.24
SMG6-205ENST00000570659 TCAF2A6NFQ2 919 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 F5H5T6 163 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 PDXKO00764 312 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 FPGTO14772 594 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 AREL1O15033 823 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 RAD1O60671 282 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 GRAP2O75791 330 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 SETSIPP0DME0 302 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 NR2F2P24468 414 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 L1CAMP32004 1257 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 NOS2P35228 1153 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 CCNHP51946 323 aaPredicted RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 NEK3P51956 506 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 HK3P52790 923 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 RPS21P63220 83 aaKnown RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 HLTFQ14527 1009 aaKnown RBP eCLIP7.31□□□□□ -1.24
SMG6-205ENST00000570659 AMZ1Q400G9 498 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 LACTB2Q53H82 288 aaPredicted RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 ANKS6Q68DC2 871 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 TFAP2DQ7Z6R9 452 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 SMYD4Q8IYR2 804 aaPredicted RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 BMPERQ8N8U9 685 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 ATP11CQ8NB49 1132 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 IRGQQ8WZA9 623 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 ART4Q93070 314 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 PAGE5Q96GU1 130 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 SERPINB11Q96P15 392 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 WRAP53Q9BUR4 548 aaKnown RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 EDEM3Q9BZQ6 932 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 TM6SF2Q9BZW4 377 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 STRADBQ9C0K7 418 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 FGF22Q9HCT0 170 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 APMAPQ9HDC9 416 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 SPATS2LQ9NUQ6 558 aaKnown RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 NDFIP2Q9NV92 336 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 RAB20Q9NX57 234 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 CGNQ9P2M7 1197 aaKnown RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 IL36AQ9UHA7 158 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 SLC25A13Q9UJS0 675 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 TRAF3IP3Q9Y228 551 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 TBC1D30Q9Y2I9 924 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 OR1A2Q9Y585 309 aa7.31□□□□□ -1.24
SMG6-205ENST00000570659 MORC2Q9Y6X9 1032 aaPredicted RBP7.31□□□□□ -1.24
SMG6-205ENST00000570659 PVALEFA0A1B0GWK0 134 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 TMEM202A6NGA9 273 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 C16orf96A6NNT2 1141 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 B4DGG1 531 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 TCP11X1B4DZS4 312 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 E5RJQ4 531 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 PAGE1O75459 146 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ADCY5O95622 1261 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 VDRP11473 427 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 GM2AP17900 193 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 CD1CP29017 333 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ACVRL1P37023 503 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 GPD2P43304 727 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 MXI1P50539 228 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 PMS1P54277 932 aaKnown RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 SULT2A1Q06520 285 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 NNTQ13423 1086 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 SLC12A1Q13621 1099 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 WSCD2Q2TBF2 565 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 FOXD4L6Q3SYB3 417 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 C5orf22Q49AR2 442 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ATXN7L2Q5T6C5 722 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 FOXD4L5Q5VV16 416 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 KRT39Q6A163 491 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 KIAA1161Q6NSJ0 714 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ESRP1Q6NXG1 681 aaKnown RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 OGFOD3Q6PK18 319 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 TMEM270Q6UE05 265 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 FOXD4L3Q6VB84 417 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 MACC1Q6ZN28 852 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ZSWIM9Q86XI8 627 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ZNF761Q86XN6 746 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 NRROSQ86YC3 692 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 DCP2Q8IU60 420 aaKnown RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 ARHGEF19Q8IW93 802 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 CACNA2D3Q8IZS8 1091 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 WDTC1Q8N5D0 677 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 ZSCAN1Q8NBB4 408 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 FBXL13Q8NEE6 735 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 FOXD4L4Q8WXT5 416 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 FAM149B1Q96BN6 582 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 BTN2A3PQ96KV6 586 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 TMEM74Q96NL1 305 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 RPRD1AQ96P16 312 aaPredicted RBP7.3□□□□□ -1.24
SMG6-205ENST00000570659 PHF12Q96QT6 1004 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 RUFY1Q96T51 708 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 EPAS1Q99814 870 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 LGR4Q9BXB1 951 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 IMPG2Q9BZV3 1241 aa7.3□□□□□ -1.24
SMG6-205ENST00000570659 SLC13A1Q9BZW2 595 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms