RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 VPS36Q86VN1 386 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 HID1Q8IV36 788 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 PIAS4Q8N2W9 510 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 GPBAR1Q8TDU6 330 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 SSC4DQ8WTU2 575 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 TSACCQ96A04 125 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 PAGE5Q96GU1 130 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 C2orf49Q9BVC5 232 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 CDH19Q9H159 772 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 ZSCAN16Q9H4T2 348 aaPredicted RBP10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 MBNL1Q9NR56 388 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 ST7Q9NRC1 585 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 MAPK8IP1Q9UQF2 711 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 ITM2BQ9Y287 266 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 DAAM1Q9Y4D1 1078 aa10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 TNRC6AQ8NDV7 1962 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-202ENST00000570380 HIVEP3Q5T1R4 2406 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 SYNJ2BP-COX16A0A087WUM0 186 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 A0A0D9SEW6 157 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 A1L4Q6 167 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 ZNF891A8MT65 544 aaPredicted RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 SART1O43290 800 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 RHOCP08134 193 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 SLC2A3P11169 496 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 FGF3P11487 239 aaPredicted RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 CTSEP14091 401 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 GLB1P16278 677 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 GNLYP22749 145 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 RPL13P26373 211 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 COL8A1P27658 744 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 CCR1P32246 355 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 GPD2P43304 727 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 BLKP51451 505 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 CDH4P55283 916 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 RIPPLY3P57055 190 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 YWHAZP63104 245 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 LRMPQ12912 555 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 ALG11Q2TAA5 492 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 C8orf34Q49A92 452 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 LACTB2Q53H82 288 aaPredicted RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 EFHC2Q5JST6 749 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 CAPRIN2Q6IMN6 1127 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 SFTPA2Q8IWL1 248 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 HEPHQ9BQS7 1158 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 POPDC2Q9HBU9 364 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 COX16Q9P0S2 106 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 HS3ST4Q9Y661 456 aa10.6□□□□□ -0.71
CTDNEP1-202ENST00000570380 ZNF106Q9H2Y7 1883 aaKnown RBP10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 C16orf96A6NNT2 1141 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 NEMP1O14524 444 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 DUX1O43812 170 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 STX10O60499 249 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 SEMA7AO75326 666 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 YEATS4O95619 227 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 PNLIPP16233 465 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 NR1D1P20393 614 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 DNA2P51530 1060 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 CCNHP51946 323 aaPredicted RBP10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 STILQ15468 1287 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 TAF5Q15542 800 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 ZCWPW2Q504Y3 356 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 ALFQ53S48 1182 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 CERCAMQ5T4B2 595 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 RESP18Q5W5W9 173 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 OGFOD3Q6PK18 319 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 RD3Q7Z3Z2 195 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 CACNA2D3Q8IZS8 1091 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 DCAF4L2Q8NA75 395 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 TP53I13Q8NBR0 393 aaPredicted RBP10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 RAB7BQ96AH8 199 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 SLC45A3Q96JT2 553 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 TAAR9Q96RI9 348 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 TRIM62Q9BVG3 475 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 FAM204AQ9H8W3 233 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 RDH14Q9HBH5 336 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 DDIT4Q9NX09 232 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 FAM13BQ9NYF5 915 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 PCDHB4Q9Y5E5 795 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 PCDHGA3Q9Y5H0 932 aa10.59□□□□□ -0.71
CTDNEP1-202ENST00000570380 K7EM74 188 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 TOR1BO14657 336 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 B4GAT1O43505 415 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 PAGE1O75459 146 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 RASGRP1O95267 797 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 PRKCGP05129 697 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 PRKAR1AP10644 381 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 TBXAS1P24557 533 aaPredicted RBP10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 GKP32189 559 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 DCTP40126 519 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 ACADSBP45954 432 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 B4GALNT1Q00973 533 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 ARHGAP44Q17R89 818 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 CARD16Q5EG05 197 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 KCTD16Q68DU8 428 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 ENPP7Q6UWV6 458 aa10.58□□□□□ -0.72
CTDNEP1-202ENST00000570380 TICAM1Q8IUC6 712 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms