RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 KIAA1211LQ6NV74 962 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 PLBD1Q6P4A8 553 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 SCARA5Q6ZMJ2 495 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 CCDC186Q7Z3E2 898 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 ZBTB46Q86UZ6 589 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 FAM217AQ8IXS0 508 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 ZC3H3Q8IXZ2 948 aaKnown RBP6.4□□□□□ -1.38
LINC00556-201ENST00000569603 NKAPQ8N5F7 415 aaKnown RBP6.4□□□□□ -1.38
LINC00556-201ENST00000569603 PHC3Q8NDX5 983 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 OR8H1Q8NGG4 311 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 UHMK1Q8TAS1 419 aaKnown RBP6.4□□□□□ -1.38
LINC00556-201ENST00000569603 RLN3Q8WXF3 142 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 SEMA4DQ92854 862 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 CCDC120Q96HB5 630 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 Q96M66 194 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 PPM1MQ96MI6 270 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 ACOX2Q99424 681 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 TRIM8Q9BZR9 551 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 DEF6Q9H4E7 631 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 CYP3A43Q9HB55 503 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 ZMAT5Q9UDW3 170 aaKnown RBP6.4□□□□□ -1.38
LINC00556-201ENST00000569603 TJP2Q9UDY2 1190 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 AK5Q9Y6K8 562 aa6.4□□□□□ -1.38
LINC00556-201ENST00000569603 ITIH6Q6UXX5 1313 aa6.4□□□□□ -1.39
LINC00556-201ENST00000569603 PTPRBP23467 1997 aa6.4□□□□□ -1.39
LINC00556-201ENST00000569603 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 IGHV1OR15-9A0A0B4J2B8 117 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 A0A1W2PQH9 124 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TCRBV21S2A2A0A5A6 115 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 C10orf142B7Z368 130 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 MDM4O15151 490 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 PLOD3O60568 738 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 RFPL1O75677 317 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 STC2O76061 302 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TOP3BO95985 862 aaKnown RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 HPXP02790 462 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 PGRP06401 933 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TRIM49P0CI25 452 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TRIM49CP0CI26 452 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 CEACAM1P13688 526 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 ACO1P21399 889 aaKnown RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TRHRP34981 398 aaPredicted RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 NDUFA8P51970 172 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 MAP3K7CLP57077 242 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 MRPS35P82673 323 aaKnown RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 CCDC15Q0P6D6 951 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 SEMA3BQ13214 749 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 EOGTQ5NDL2 527 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 IRGCQ6NXR0 463 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 MTERF4Q7Z6M4 381 aaKnown RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 GALNT5Q7Z7M9 940 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 SYT12Q8IV01 421 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 SLC41A1Q8IVJ1 513 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 ELOA2Q8IYF1 753 aaPredicted RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TMEFF1Q8IYR6 380 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 GUF1Q8N442 669 aaKnown RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TAB3Q8N5C8 712 aaPredicted RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 UBR7Q8N806 425 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 GSDMBQ8TAX9 411 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 THAP3Q8WTV1 239 aaPredicted RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 C17orf50Q8WW18 174 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 HMGB4Q8WW32 186 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 FAXDC2Q96IV6 333 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 GOLPH3LQ9H4A5 285 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 FBXO44Q9H4M3 255 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 SP110Q9HB58 689 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 CD93Q9NPY3 652 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 TMEM9BQ9NQ34 198 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 FAM49BQ9NUQ9 324 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 EXOC1Q9NV70 894 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 ZNHIT6Q9NWK9 470 aaKnown RBP6.39□□□□□ -1.39
LINC00556-201ENST00000569603 CALCOCO1Q9P1Z2 691 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 DEC1Q9P2X7 70 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 CFAP45Q9UL16 551 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 SLC27A6Q9Y2P4 619 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 COQ4Q9Y3A0 265 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 PCDHA5Q9Y5H7 936 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 ATP8B3O60423 1300 aa6.39□□□□□ -1.39
LINC00556-201ENST00000569603 ZNF462Q96JM2 2506 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 A0A1W2PQ27 194 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 A0A1W2PQ64 194 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 A0A1W2PQD8 194 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 PDPK1O15530 556 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 SGTAO43765 313 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 E2F6O75461 281 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 IGLV3-19P01714 112 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 PROS1P07225 676 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 INHBBP09529 407 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 TYRP14679 529 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 DESP17661 470 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 ENGP17813 658 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 CAPN3P20807 821 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 GLDCP23378 1020 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 NR2F2P24468 414 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 NTSR1P30989 418 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 GBP1P32455 592 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 GTF2H1P32780 548 aa6.38□□□□□ -1.39
LINC00556-201ENST00000569603 BUD31P41223 144 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms