RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 RAB7BQ96AH8 199 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 VOPP1Q96AW1 172 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 SKA1Q96BD8 255 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 KLHL32Q96NJ5 620 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 ZNF670Q9BS34 389 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 CALN1Q9BXU9 219 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 IMPACTQ9P2X3 320 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 DMTF1Q9Y222 760 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 A0A1B0GVT2 93 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 SOWAHDA6NJG2 315 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 AP1G1O43747 822 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 PCDH8O95206 1070 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 NDUFA10O95299 355 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 KDELR1P24390 212 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 CD38P28907 300 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 MAT2AP31153 395 aaKnown RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 NOP2P46087 812 aaKnown RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 CSNK1DP48730 415 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 HADHBP55084 474 aaKnown RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 BNC1Q01954 994 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 NSUN2Q08J23 767 aaKnown RBP eCLIP14□□□□□ -0.17
HERPUD1-218ENST00000569569 SETMARQ53H47 684 aaPredicted RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 TMCO4Q5TGY1 634 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 PARS2Q7L3T8 475 aaKnown RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 HORMAD1Q86X24 394 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 LRRC49Q8IUZ0 686 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 TSEN2Q8NCE0 465 aaKnown RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 PCDH19Q8TAB3 1148 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 FEM1CQ96JP0 617 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 SERAC1Q96JX3 654 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 EXOC2Q96KP1 924 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 SLC6A18Q96N87 628 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 ZNF599Q96NL3 588 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 CINPQ9BW66 212 aaPredicted RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 AASDHPPTQ9NRN7 309 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 DNAAF2Q9NVR5 837 aaKnown RBP14□□□□□ -0.17
HERPUD1-218ENST00000569569 ANKRD6Q9Y2G4 727 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 FADS3Q9Y5Q0 445 aa14□□□□□ -0.17
HERPUD1-218ENST00000569569 CACNA1AO00555 2505 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 A0A0A6YYK5 440 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 A0A1W2PQU0 124 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 VILLO15195 856 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 INSIG1O15503 277 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 MAFKO60675 156 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 IPO7O95373 1038 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 CER1O95813 267 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 RENBPP51606 427 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 SLC14A1Q13336 389 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 LBRQ14739 615 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 PAFAH1B3Q15102 231 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 KIF19Q2TAC6 998 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 HLA-BQ31612 363 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 SLC45A4Q5BKX6 768 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 LRRC38Q5VT99 294 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 NAPEPLDQ6IQ20 393 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 SRLQ86TD4 932 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 TTC7BQ86TV6 843 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 VSIG1Q86XK7 387 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 ATPAF2Q8N5M1 289 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 OR2I1PQ8NGU4 316 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 HCAR2Q8TDS4 363 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 NSMCE1Q8WV22 266 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 RAPGEF5Q92565 580 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 FAF2Q96CS3 445 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 SUV39H2Q9H5I1 410 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 GAREM1Q9H706 876 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 KLHL11Q9NVR0 708 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 DKK3Q9UBP4 350 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 SEPT3Q9UH03 358 aa13.99□□□□□ -0.17
HERPUD1-218ENST00000569569 A0A1W2PR77 199 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 LRRD1A4D1F6 860 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 UPK3BL1B0FP48 263 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 ZNF487B1APH4 448 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 UPK3BL2E5RIL1 263 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 PRAMEF26H0Y7S4 382 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 WNT9AO14904 365 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 TSPAN6O43657 245 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 GJB3O75712 270 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 COMTP21964 271 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 C21orf59P57076 290 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 RPS21P63220 83 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 SLC10A7Q0GE19 358 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 STAT4Q14765 748 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 ZNF284Q2VY69 593 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 ODF2Q5BJF6 829 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 NCBP2-AS2Q69YL0 99 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 KIAA1161Q6NSJ0 714 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 ZSCAN30Q86W11 494 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 RHOT1Q8IXI2 618 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 BBS5Q8N3I7 341 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 MFSD2AQ8NA29 543 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 SPC24Q8NBT2 197 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 ZNF641Q96N77 438 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 RNF157Q96PX1 679 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 PSKH2Q96QS6 385 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 TUBGCP5Q96RT8 1024 aa13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 BAG1Q99933 345 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 ZFR2Q9UPR6 939 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-218ENST00000569569 SNX11Q9Y5W9 270 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms