RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TTC34A8MYJ7 566 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SLC28A1O00337 649 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 NPHS1O60500 1241 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 KLHL18O94889 574 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF24P17028 368 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 STARD3Q14849 445 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 NR6A1Q15406 480 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SYT16Q17RD7 645 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ZSWIM7Q19AV6 140 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SWI5Q1ZZU3 235 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PABPC1LQ4VXU2 614 aaKnown RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 LPCAT4Q643R3 524 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CYP2R1Q6VVX0 501 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PHF13Q86YI8 300 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 UBR7Q8N806 425 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CDYL2Q8N8U2 506 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 STAG3L4Q8TBR4 150 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 HDAC2Q92769 488 aaKnown RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 HYLS1Q96M11 299 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 QRFPRQ96P65 431 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 RETREG1Q9H6L5 497 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CLEC11AQ9Y240 323 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CYP27B1O15528 508 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 TOP3BO95985 862 aaKnown RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CST1P01037 141 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 DYNLL1P63167 89 aaKnown RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF404Q494X3 552 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 RFTN2Q52LD8 501 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 BAIAP2L2Q6UXY1 529 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 TAF8Q7Z7C8 310 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ANKRD13BQ86YJ7 626 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 CCDC107Q8WV48 283 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 FRMD6Q96NE9 622 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 HAPLN3Q96S86 360 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PRMT7Q9NVM4 692 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 POLR3BQ9NW08 1133 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-216ENST00000569240 TFCP2L1Q9NZI6 479 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SLC7A8Q9UHI5 535 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 USP18Q9UMW8 372 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PLD2O14939 933 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 FGFR2P21802 821 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 AIF1P55008 147 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 PKNOX1P55347 436 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SLC30A8Q8IWU4 369 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 SIMC1Q8NDZ2 872 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ZNF671Q8TAW3 534 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 UCMAQ8WVF2 138 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 THRSPQ92748 146 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 MTRRQ9UBK8 725 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 KCNH4Q9UQ05 1017 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ERBB3P21860 1342 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 TNS3Q68CZ2 1445 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ABCC3O15438 1527 aa7.17□□□□□ -1.26
CNOT1-216ENST00000569240 ANKDD1BA6NHY2 528 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 MED24O75448 989 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 METTL18O95568 372 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 MYBP10242 640 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 SSTR1P30872 391 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 HPCAL1P37235 193 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 E2F2Q14209 437 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 PTRHD1Q6GMV3 140 aaKnown RBP7.16□□□□□ -1.26
CNOT1-216ENST00000569240 SPESP1Q6UW49 350 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 LRRC55Q6ZSA7 311 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ELMOD1Q8N336 334 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 CAMKK1Q8N5S9 505 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 SLC20A1Q8WUM9 679 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ZUFSPQ96AP4 578 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 CNDP2Q96KP4 475 aaKnown RBP7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ACE2Q9BYF1 805 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-216ENST00000569240 SEMA6AQ9H2E6 1030 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ZSCAN32Q9NX65 697 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 TAS2R13Q9NYV9 303 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 COPZ2Q9P299 210 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 HMGXB4Q9UGU5 601 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 CLTCL1P53675 1640 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 IL7P13232 177 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 KRT77Q7Z794 578 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 OFCC1Q8IZS5 231 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 POF1BQ8WVV4 589 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 DPF3Q92784 378 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 TMEM121Q9BTD3 319 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ROGDIQ9GZN7 287 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 GGA3Q9NZ52 723 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 CYP3A7-CYP3A51PA0A087WV96 503 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 FAM47E-STBD1D6RA91 191 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ADAMDEC1O15204 470 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 TSPAN1O60635 241 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 PRKCBP05771 671 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ACO1P21399 889 aaKnown RBP7.16□□□□□ -1.26
CNOT1-216ENST00000569240 CYP3A7P24462 503 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ATP12AP54707 1039 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ZBTB6Q15916 424 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 PROSER3Q2NL68 480 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 VPS26BQ4G0F5 336 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 MIIPQ5JXC2 388 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 ATG9AQ7Z3C6 839 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 WDR49Q8IV35 697 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 C10orf107Q8IVU9 208 aa7.16□□□□□ -1.26
CNOT1-216ENST00000569240 GLB1L3Q8NCI6 653 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-216ENST00000569240 OR5K1Q8NHB7 308 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms