RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 SNX16P57768 344 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 PITX1P78337 314 aaPredicted RBP11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 TFDP2Q14188 446 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 LPAL2Q16609 132 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 GEN1Q17RS7 908 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 FAM133BQ5BKY9 247 aaKnown RBP11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 PIK3R6Q5UE93 754 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 EGFLAMQ63HQ2 1017 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 OLFML1Q6UWY5 402 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 PRR23BQ6ZRT6 265 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 ASRGL1Q7L266 308 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 PRUNE1Q86TP1 453 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 TAC4Q86UU9 113 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 PDIK1LQ8N165 341 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 JOSD2Q8TAC2 188 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 GDAP1Q8TB36 358 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 SLC2A13Q96QE2 648 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 ACOX2Q99424 681 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 CNPY3Q9BT09 278 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 SYNCQ9H7C4 482 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 RAB23Q9ULC3 237 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 USH1CQ9Y6N9 552 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 A0A1W2PQF6 199 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 ZNF487B1APH4 448 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 MCF2LO15068 1137 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 TM9SF1O15321 606 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 TRUB2O95900 331 aaKnown RBP11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 IFNB1P01574 187 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 ETS1P14921 441 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 IL1R2P27930 398 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 SLC6A4P31645 630 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 RPL22P35268 128 aaKnown RBP11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 SLC11A2P49281 568 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 SLC6A3Q01959 620 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 DCAF6Q58WW2 860 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 MPP7Q5T2T1 576 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 LAIR1Q6GTX8 287 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 NADSYN1Q6IA69 706 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 OR6B2Q6IFH4 312 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 ANO7Q6IWH7 933 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 CGB2Q6NT52 195 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 RFWD3Q6PCD5 774 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 FAM183BPQ6ZVS7 135 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 TRMT11Q7Z4G4 463 aaKnown RBP11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 DEFB106AQ8N104 65 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 FITM2Q8N6M3 262 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 KCTD6Q8NC69 237 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 MDGA1Q8NFP4 955 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 FBF1Q8TES7 1133 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 ZC3H10Q96K80 434 aaKnown RBP11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 CD248Q9HCU0 757 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 NCDNQ9UBB6 729 aa11.8□□□□□ -0.52
SNAPC5-208ENST00000568875 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 POC1B-GALNT4F8VUJ3 575 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 GOLGA8SH3BPF8 625 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 IRAK2O43187 625 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 EDF1O60869 148 aaKnown RBP11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 DCTN3O75935 186 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 RETP07949 1114 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 EZRP15311 586 aaKnown RBP11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 MIPP30301 263 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 SGSHP51688 502 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 GPX6P59796 221 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 FASTKD3Q14CZ7 662 aaKnown RBP11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 SETDB1Q15047 1291 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 PDK2Q15119 407 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 TMEM215Q68D42 235 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 C4orf22Q6V702 233 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 CEP68Q76N32 757 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 SLC26A9Q7LBE3 791 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 KIAA0907Q7Z7F0 614 aaPredicted RBP11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 ZDHHC17Q8IUH5 632 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 MAP7D3Q8IWC1 876 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 FAM160A2Q8N612 972 aaPredicted RBP11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 LRRC8CQ8TDW0 803 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 KLHL29Q96CT2 875 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 MYEOVQ96EZ4 313 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 GABRG3Q99928 467 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 VPS11Q9H270 941 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 NOD2Q9HC29 1040 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 TXLNGQ9NUQ3 528 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 ELOVL2Q9NXB9 296 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 USP18Q9UMW8 372 aa11.79□□□□□ -0.52
SNAPC5-208ENST00000568875 KCNU1A8MYU2 1149 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 WASH3PC4AMC7 463 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 DCLK1O15075 740 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 TIMM44O43615 452 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 GRAP2O75791 330 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 ALDH1A2O94788 518 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 UNC5CO95185 931 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 CA4P22748 312 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 HLA-FP30511 346 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 WASP42768 502 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 EIF3EP60228 445 aaKnown RBP11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 ENPP2Q13822 863 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 NOMO1Q15155 1222 aa11.78□□□□□ -0.52
SNAPC5-208ENST00000568875 BOLA3Q53S33 107 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms