RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 CARD16Q5EG05 197 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 DENND1BQ6P3S1 775 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 LVRNQ6Q4G3 990 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 MACC1Q6ZN28 852 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 ATCAYQ86WG3 371 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 GKN2Q86XP6 184 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 DEFB106AQ8N104 65 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 RYBPQ8N488 228 aaPredicted RBP16.45■□□□□ 0.22
CLK3-223ENST00000568488 IL22RA1Q8N6P7 574 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 C9orf43Q8TAL5 461 aaPredicted RBP16.45■□□□□ 0.22
CLK3-223ENST00000568488 ASB12Q8WXK4 309 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 CENPTQ96BT3 561 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 EDEM3Q9BZQ6 932 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 ZDHHC6Q9H6R6 413 aa16.45■□□□□ 0.22
CLK3-223ENST00000568488 SCN8AQ9UQD0 1980 aa16.44■□□□□ 0.22
CLK3-223ENST00000568488 A0A1B0GVL5 298 aa16.44■□□□□ 0.22
CLK3-223ENST00000568488 PAGE1O75459 146 aa16.44■□□□□ 0.22
CLK3-223ENST00000568488 CCNHP51946 323 aaPredicted RBP16.44■□□□□ 0.22
CLK3-223ENST00000568488 DCAF4L2Q8NA75 395 aa16.44■□□□□ 0.22
CLK3-223ENST00000568488 NT5C1BQ96P26 610 aa16.44■□□□□ 0.22
CLK3-223ENST00000568488 SLC4A5Q9BY07 1137 aa16.44■□□□□ 0.22
CLK3-223ENST00000568488 AKAP7Q9P0M2 348 aaPredicted RBP16.44■□□□□ 0.22
CLK3-223ENST00000568488 C16orf96A6NNT2 1141 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 MMP20O60882 483 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 ZNF821O75541 412 aaPredicted RBP16.43■□□□□ 0.22
CLK3-223ENST00000568488 GKP32189 559 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 HK3P52790 923 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 RRAGAQ7L523 313 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 OR7D4Q8NG98 312 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 NKD1Q969G9 470 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 RAB7BQ96AH8 199 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 INTS4Q96HW7 963 aaKnown RBP16.43■□□□□ 0.22
CLK3-223ENST00000568488 SEMA6CQ9H3T2 930 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 MBNL1Q9NR56 388 aaKnown RBP16.43■□□□□ 0.22
CLK3-223ENST00000568488 HECAQ9UBI9 543 aaPredicted RBP16.43■□□□□ 0.22
CLK3-223ENST00000568488 USP25Q9UHP3 1055 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 UNC13CQ8NB66 2214 aa16.43■□□□□ 0.22
CLK3-223ENST00000568488 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.42■□□□□ 0.22
CLK3-223ENST00000568488 MTSS1O43312 755 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 GRAP2O75791 330 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 CCL4P13236 92 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 LIFP15018 202 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 PFKFB1P16118 471 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 ARHGEF7Q14155 803 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 C16orf72Q14CZ0 275 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 RETSATQ6NUM9 610 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 ENPP7Q6UWV6 458 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 TMPRSS9Q7Z410 1059 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 TFAP2DQ7Z6R9 452 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 SETD3Q86TU7 594 aaPredicted RBP16.42■□□□□ 0.22
CLK3-223ENST00000568488 SMYD4Q8IYR2 804 aaPredicted RBP16.42■□□□□ 0.22
CLK3-223ENST00000568488 PCDH20Q8N6Y1 951 aaKnown RBP16.42■□□□□ 0.22
CLK3-223ENST00000568488 OR6K2Q8NGY2 324 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 STK32AQ8WU08 396 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 MIB2Q96AX9 1013 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 TM6SF2Q9BZW4 377 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 TMPRSS4Q9NRS4 437 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 FCF1Q9Y324 198 aaKnown RBP16.42■□□□□ 0.22
CLK3-223ENST00000568488 SNX10Q9Y5X0 201 aa16.42■□□□□ 0.22
CLK3-223ENST00000568488 TM7SF2O76062 418 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 RASGRP1O95267 797 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 GLB1P16278 677 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 MTA1Q13330 715 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 ALG11Q2TAA5 492 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 C5orf22Q49AR2 442 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 LRRC73Q5JTD7 316 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 TMEM110Q86TL2 294 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 CATSPER2Q96P56 530 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 C1QTNF7Q9BXJ2 289 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 CEP44Q9C0F1 390 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 MPP6Q9NZW5 540 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 LRIT1Q9P2V4 623 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 APPL1Q9UKG1 709 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 ICE1Q9Y2F5 2266 aa16.41■□□□□ 0.22
CLK3-223ENST00000568488 LRRK1Q38SD2 2015 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 ZNF891A8MT65 544 aaPredicted RBP16.4■□□□□ 0.22
CLK3-223ENST00000568488 AGFG2O95081 481 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 KRT5P13647 590 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 OR1E1P30953 314 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 SERPINH1P50454 418 aaKnown RBP16.4■□□□□ 0.22
CLK3-223ENST00000568488 SLC20A2Q08357 652 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 DPYDQ12882 1025 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 KLHL40Q2TBA0 621 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 ZNF805Q5CZA5 627 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 NYAP1Q6ZVC0 841 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 SPRED1Q7Z699 444 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 TTC7BQ86TV6 843 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 SLITRK4Q8IW52 837 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 FAM46DQ8NEK8 389 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 GPR156Q8NFN8 814 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 CXorf40AQ8TE69 158 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 ARHGEF26Q96DR7 871 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 ABHD17AQ96GS6 310 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 SLC2A13Q96QE2 648 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 TAAR9Q96RI9 348 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 EPAS1Q99814 870 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 B3GNT4Q9C0J1 378 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 RDH14Q9HBH5 336 aa16.4■□□□□ 0.22
CLK3-223ENST00000568488 METTL14Q9HCE5 456 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms