RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SERINC3Q13530 473 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 COL28A1Q2UY09 1125 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 PARP15Q460N3 678 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 ZNF542PQ5EBM4 170 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 DCUN1D2Q6PH85 259 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 ZNF354CQ86Y25 554 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 DENND6BQ8NEG7 585 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 NXPE2Q96DL1 559 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 VCPIP1Q96JH7 1222 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 GDAP1L1Q96MZ0 367 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 BPIFA3Q9BQP9 254 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 CATSPERBQ9H7T0 1116 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 RTN4Q9NQC3 1192 aaKnown RBP19.18■□□□□ 0.66
SPSB3-210ENST00000568416 DNAJC28Q9NX36 388 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 MFHAS1Q9Y4C4 1052 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 ZZEF1O43149 2961 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 KNL1Q8NG31 2342 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 NEMP1O14524 444 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 IGSF6O95976 241 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 CSF2P04141 144 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 PFN3P60673 137 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 RHOAP61586 193 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 DAB2P98082 770 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 ANO6Q4KMQ2 910 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 PPP1R2P3Q6NXS1 205 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 NETO2Q8NC67 525 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 HNRNPLLQ8WVV9 542 aaKnown RBP19.17■□□□□ 0.66
SPSB3-210ENST00000568416 ARHGEF26Q96DR7 871 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 NRSN2Q9GZP1 204 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 NLGN3Q9NZ94 848 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 LHX3Q9UBR4 397 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 CHD5Q8TDI0 1954 aa19.17■□□□□ 0.66
SPSB3-210ENST00000568416 A0A087WV48 116 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 LRRC53A6NM62 1247 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 SCAMP1O15126 338 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 FGF10O15520 208 aaPredicted RBP19.16■□□□□ 0.66
SPSB3-210ENST00000568416 ALPPL2P10696 532 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 CKMT1AP12532 417 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 HOXB3P14651 431 aaPredicted RBP19.16■□□□□ 0.66
SPSB3-210ENST00000568416 NME1P15531 152 aaKnown RBP19.16■□□□□ 0.66
SPSB3-210ENST00000568416 HTR7P34969 479 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 HNRNPKP61978 463 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPSB3-210ENST00000568416 E2F1Q01094 437 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 RAD51Q06609 339 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 MAMLD1Q13495 774 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 RTP5Q14D33 572 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 CYTH1Q15438 398 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 TPRG1LQ5T0D9 272 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 PLEKHA7Q6IQ23 1121 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 TMC6Q7Z403 805 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 TTC7BQ86TV6 843 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 PARGQ86W56 976 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 NAT10Q9H0A0 1025 aaKnown RBP19.16■□□□□ 0.66
SPSB3-210ENST00000568416 LRRC19Q9H756 370 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 PDFQ9HBH1 243 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 PARVAQ9NVD7 372 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 GPATCH2LQ9NWQ4 482 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 DKK3Q9UBP4 350 aa19.16■□□□□ 0.66
SPSB3-210ENST00000568416 LY6G6EA0A0G2JKS1 128 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 NEMP2A6NFY4 417 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 INSIG1O15503 277 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 DESP17661 470 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 TPI1P60174 286 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 PDE1CQ14123 709 aaPredicted RBP19.15■□□□□ 0.66
SPSB3-210ENST00000568416 LRRC73Q5JTD7 316 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 KDM7AQ6ZMT4 941 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 PDZD3Q86UT5 571 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 ARFGAP1Q8N6T3 406 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 DCBLD1Q8N8Z6 715 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 FAM181AQ8N9Y4 354 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 ZNF548Q8NEK5 533 aaPredicted RBP19.15■□□□□ 0.66
SPSB3-210ENST00000568416 CENPTQ96BT3 561 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 APOLD1Q96LR9 279 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 CPEB1Q9BZB8 566 aaKnown RBP19.15■□□□□ 0.66
SPSB3-210ENST00000568416 KLF15Q9UIH9 416 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 AP4E1Q9UPM8 1137 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 CLCA2Q9UQC9 943 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 U3KQA8 63 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 DOCK9Q9BZ29 2069 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 CHD6Q8TD26 2715 aa19.15■□□□□ 0.66
SPSB3-210ENST00000568416 SMTNL1A8MU46 457 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 TMCO5BA8MYB1 307 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 H3BM21 787 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 K7ESM1 405 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 ATMINO43313 823 aaPredicted RBP19.14■□□□□ 0.65
SPSB3-210ENST00000568416 NEBLO76041 1014 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 TIMP2P16035 220 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 ITIH2P19823 946 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 PSMA2P25787 234 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 NDST2P52849 883 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 CA9Q16790 459 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 DUSP23Q9BVJ7 150 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 UBA2Q9UBT2 640 aaPredicted RBP19.14■□□□□ 0.65
SPSB3-210ENST00000568416 IPO11Q9UI26 975 aaKnown RBP19.14■□□□□ 0.65
SPSB3-210ENST00000568416 CSNK1G3Q9Y6M4 447 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 FREM2Q5SZK8 3169 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 DMXL2Q8TDJ6 3036 aa19.14■□□□□ 0.65
SPSB3-210ENST00000568416 A0A1W2PQC6 194 aa19.13■□□□□ 0.65
SPSB3-210ENST00000568416 TMEM191CA6NGB0 347 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms