RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 EVLQ9UI08 416 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 TPX2Q9ULW0 747 aaKnown RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 SMG5Q9UPR3 1016 aaKnown RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 TTLL3Q9Y4R7 772 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 LRRC72A6NJI9 287 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 USP27XA6NNY8 438 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 H7C0C1 242 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 KCNK1O00180 336 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 INSIG1O15503 277 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 SOCS5O75159 536 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 NFKBIAP25963 317 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 DRD3P35462 400 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ATP5OP48047 213 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 SCNN1BP51168 640 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 OTUD4Q01804 1114 aaKnown RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 NHLH1Q02575 133 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ADCY2Q08462 1091 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ITKQ08881 620 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 KLF1Q13351 362 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 HS1BP3Q53T59 392 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 SLC45A4Q5BKX6 768 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ZNF805Q5CZA5 627 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 PMS2CLQ68D20 193 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ALG1LQ6GMV1 187 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 AADACL2Q6P093 401 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 BRAT1Q6PJG6 821 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ERN2Q76MJ5 926 aaKnown RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 FAM124AQ86V42 546 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 AADATQ8N5Z0 425 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 FOXJ1Q92949 421 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 RAB7BQ96AH8 199 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 FAM131CQ96AQ9 280 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 TOE1Q96GM8 510 aaKnown RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ZC3H10Q96K80 434 aaKnown RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 ZNF641Q96N77 438 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 NAP1L3Q99457 506 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 HDAC8Q9BY41 377 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 KDM4CQ9H3R0 1056 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 RBM22Q9NW64 420 aaKnown RBP eCLIP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 SAE1Q9UBE0 346 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-208ENST00000567250 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 SARDHQ9UL12 918 aa12.32□□□□□ -0.44
SF3B3-208ENST00000567250 VPS13AQ96RL7 3174 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 CFAP69A5D8W1 941 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 ENC1O14682 589 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 HRO43593 1189 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 PLRG1O43660 514 aaKnown RBP12.31□□□□□ -0.44
SF3B3-208ENST00000567250 SEMA4FO95754 770 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 HLA-DQB2P05538 268 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 SERPINF2P08697 491 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 RBP3P10745 1247 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 CR2P20023 1033 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 SUOXP51687 545 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 ADPRHP54922 357 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 EIF3EP60228 445 aaKnown RBP12.31□□□□□ -0.44
SF3B3-208ENST00000567250 MAXP61244 160 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 GNG11P61952 73 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 SRSF5Q13243 272 aaKnown RBP12.31□□□□□ -0.44
SF3B3-208ENST00000567250 POM121L1PQ3SYA9 428 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 PLK5Q496M5 336 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 AGBL4Q5VU57 503 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 LAIR1Q6GTX8 287 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 FBXL19Q6PCT2 694 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 PARS2Q7L3T8 475 aaKnown RBP12.31□□□□□ -0.44
SF3B3-208ENST00000567250 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 SLC13A5Q86YT5 568 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-208ENST00000567250 CADM4Q8NFZ8 388 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 OR2T34Q8NGX1 318 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-208ENST00000567250 LOXL4Q96JB6 756 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 PBKQ96KB5 322 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 KLHL32Q96NJ5 620 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 SEMA3CQ99985 751 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 HERPUD2Q9BSE4 406 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 PREBQ9HCU5 417 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 CD93Q9NPY3 652 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 GMEB2Q9UKD1 530 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 INVSQ9Y283 1065 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 ZKSCAN5Q9Y2L8 839 aa12.31□□□□□ -0.44
SF3B3-208ENST00000567250 TSPAN11A1L157 253 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 MEI4A8MW99 385 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 RNF103O00237 685 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 CES2O00748 559 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 MUSKO15146 869 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 CEP104O60308 925 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 PIGNO95427 931 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 JCHAINP01591 159 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 LMNAP02545 664 aaKnown RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 ATP1A1P05023 1023 aaKnown RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 ADRB3P13945 408 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 BCKDHBP21953 392 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 ACSL1P33121 698 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 RGRP47804 291 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms