RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ABCG4Q9H172 646 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 DKK3Q9UBP4 350 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 NEU3Q9UQ49 428 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 SIK3Q9Y2K2 1263 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 DOCK4Q8N1I0 1966 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 FAM170AA1A519 330 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 WASH4PA8MWX3 477 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 KRIT1O00522 736 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 DXOO77932 396 aaKnown RBP15.21■□□□□ 0.03
RNF40-209ENST00000566703 KLK7P49862 253 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 SUOXP51687 545 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 AIF1P55008 147 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 PDE1CQ14123 709 aaPredicted RBP15.21■□□□□ 0.03
RNF40-209ENST00000566703 CLEC16AQ2KHT3 1053 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 GDPD4Q6W3E5 623 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 KDM7AQ6ZMT4 941 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 PHLDB2Q86SQ0 1253 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 TTC7BQ86TV6 843 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 CCDC185Q8N715 623 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 RTL3Q8N8U3 475 aaKnown RBP15.21■□□□□ 0.03
RNF40-209ENST00000566703 ZNF548Q8NEK5 533 aaPredicted RBP15.21■□□□□ 0.03
RNF40-209ENST00000566703 ANKRD20A12PQ8NF67 263 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 TPCN2Q8NHX9 752 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 HCAR2Q8TDS4 363 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 CENPTQ96BT3 561 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 GDAP1L1Q96MZ0 367 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 ZNF578Q96N58 590 aaPredicted RBP15.21■□□□□ 0.03
RNF40-209ENST00000566703 KLHL32Q96NJ5 620 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 C1QTNF7Q9BXJ2 289 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 MAGEB5Q9BZ81 275 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 TTYH3Q9C0H2 523 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 DONSONQ9NYP3 566 aa15.21■□□□□ 0.03
RNF40-209ENST00000566703 ANKRD11Q6UB99 2663 aaPredicted RBP15.2■□□□□ 0.02
RNF40-209ENST00000566703 LY6G6EA0A0G2JKS1 128 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 EPHB6O15197 1021 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 AQP9O43315 295 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 BUB1O43683 1085 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 UGT2B4P06133 528 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 JUNDP17535 347 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 GKP32189 559 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 LSSP48449 732 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 ZNF143P52747 638 aaPredicted RBP15.2■□□□□ 0.02
RNF40-209ENST00000566703 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
RNF40-209ENST00000566703 SYCP1Q15431 976 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 EFHC2Q5JST6 749 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
RNF40-209ENST00000566703 NEK11Q8NG66 645 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 OR6K2Q8NGY2 324 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 CRELD1Q96HD1 420 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 CPEB1Q9BZB8 566 aaKnown RBP15.2■□□□□ 0.02
RNF40-209ENST00000566703 CATSPERBQ9H7T0 1116 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 LMBRD1Q9NUN5 540 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 FANCLQ9NW38 375 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 SPASTQ9UBP0 616 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 LIMA1Q9UHB6 759 aaKnown RBP15.2■□□□□ 0.02
RNF40-209ENST00000566703 U3KQA8 63 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 TRPM6Q9BX84 2022 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 ZFYVE26Q68DK2 2539 aa15.2■□□□□ 0.02
RNF40-209ENST00000566703 TCRBV5S1A1TA0A578 114 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 EME2A4GXA9 379 aaPredicted RBP15.19■□□□□ 0.02
RNF40-209ENST00000566703 ANKRD62A6NC57 917 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 SPINT1O43278 529 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 NEBLO76041 1014 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 TM7SF2O76062 418 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 TMCC1O94876 653 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 GJB6O95452 261 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 IGSF6O95976 241 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 CCDC172P0C7W6 258 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 EPHB2P29323 1055 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 HTR7P34969 479 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 RPIAP49247 311 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 THOP1P52888 689 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 COPB1P53618 953 aaKnown RBP15.19■□□□□ 0.02
RNF40-209ENST00000566703 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 EIF2B5Q13144 721 aaKnown RBP15.19■□□□□ 0.02
RNF40-209ENST00000566703 GRM3Q14832 879 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 IGF2-ASQ6U949 168 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 UMODL1-AS1Q8N2C9 162 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 ZNF248Q8NDW4 579 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 IFI44Q8TCB0 444 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 MAPK15Q8TD08 544 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 GLMNQ92990 594 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 IL12RB2Q99665 862 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 NOL6Q9H6R4 1146 aaKnown RBP15.19■□□□□ 0.02
RNF40-209ENST00000566703 POLR1BQ9H9Y6 1135 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 KLF15Q9UIH9 416 aa15.19■□□□□ 0.02
RNF40-209ENST00000566703 FREM2Q5SZK8 3169 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 ATRXP46100 2492 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 LGALS16A8MUM7 142 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 CSO75390 466 aaKnown RBP15.18■□□□□ 0.02
RNF40-209ENST00000566703 TIMP2P16035 220 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 DESP17661 470 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 PEX5P50542 639 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 RHOAP61586 193 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 SERINC3Q13530 473 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 PARP15Q460N3 678 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 TMEM52BQ4KMG9 183 aa15.18■□□□□ 0.02
RNF40-209ENST00000566703 ATXN7L2Q5T6C5 722 aaPredicted RBP15.18■□□□□ 0.02
RNF40-209ENST00000566703 PPP1R2P3Q6NXS1 205 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms