RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RGRP47804 291 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 PSMD8P48556 350 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 COPAP53621 1224 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 ITKQ08881 620 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 SNX1Q13596 522 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 BYSLQ13895 437 aaKnown RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 CCNG2Q16589 344 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 ZNF776Q68DI1 518 aaPredicted RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 KIAA1324Q6UXG2 1013 aaKnown RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 CREG2Q8IUH2 290 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 PGBD5Q8N414 524 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
KARS-207ENST00000566560 PRELID2Q8N945 189 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 CHST14Q8NCH0 376 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 VAT1Q99536 393 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 IL12RB2Q99665 862 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 TMEM121Q9BTD3 319 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 POLR1EQ9GZS1 481 aaKnown RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 RSPH9Q9H1X1 276 aaPredicted RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 HOMER3Q9NSC5 361 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 HECAQ9UBI9 543 aaPredicted RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 IL36AQ9UHA7 158 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 AMACRQ9UHK6 382 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 ESPNB1AK53 854 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 C1QTNF3-AMACRE9PGA6 284 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 DLL1O00548 723 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 PHF2O75151 1096 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 GJB3O75712 270 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 URI1O94763 535 aaPredicted RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 ADH1BP00325 375 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 IL1BP01584 269 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 PRNPP04156 253 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 CTSLP07711 333 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 GABRG2P18507 467 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 CHRNA3P32297 505 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 PAFAH1B1P43034 410 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 SCNN1BP51168 640 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 GDF10P55107 478 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 AP1S1P61966 158 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 DSC2Q02487 901 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 RAD51Q06609 339 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 WASHC5Q12768 1159 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 OASLQ15646 514 aaKnown RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 TTC31Q49AM3 519 aaPredicted RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 TMEM259Q4ZIN3 620 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 TEX44Q53QW1 395 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 ALG1LQ6GMV1 187 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 DRICH1Q6PGQ1 229 aaPredicted RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 MMAAQ8IVH4 418 aaKnown RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 C1orf210Q8IVY1 113 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 FAM71DQ8N9W8 422 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 C12orf50Q8NA57 414 aaPredicted RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 MDGA1Q8NFP4 955 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 KIF18AQ8NI77 898 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 PRR7Q8TB68 274 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 PRCCQ92733 491 aaPredicted RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 MRGPRX1Q96LB2 322 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 SPATA13Q96N96 652 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 AGAP3Q96P47 875 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 NUDCD1Q96RS6 583 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 HEPHQ9BQS7 1158 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 MKRN2Q9H000 416 aaKnown RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 SLC6A17Q9H1V8 727 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 RNF14Q9UBS8 474 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 EVLQ9UI08 416 aaPredicted RBP11.62□□□□□ -0.55
KARS-207ENST00000566560 ZNF148Q9UQR1 794 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 WASF2Q9Y6W5 498 aa11.62□□□□□ -0.55
KARS-207ENST00000566560 EML5Q05BV3 1969 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 PLXND1Q9Y4D7 1925 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 K7ESF4 209 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 INSIG1O15503 277 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 LEFTY1O75610 366 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 PIGNO95427 931 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 UGT2B4P06133 528 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 ITGAVP06756 1048 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 CR2P20023 1033 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 GKP32189 559 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 CSNK1DP48730 415 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 NRLP54845 237 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 RPS14P62263 151 aaKnown RBP11.61□□□□□ -0.55
KARS-207ENST00000566560 CKAP4Q07065 602 aaKnown RBP11.61□□□□□ -0.55
KARS-207ENST00000566560 GRM3Q14832 879 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 CST6Q15828 149 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 CYP1B1Q16678 543 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 MYLK3Q32MK0 819 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 POM121L1PQ3SYA9 428 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 MSS51Q4VC12 460 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 RALGPS1Q5JS13 557 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 FAM182AQ5T1J6 154 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 ITPRIPL1Q6GPH6 555 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 SRLQ86TD4 932 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 RASSF3Q86WH2 238 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 TMPRSS6Q8IU80 811 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 ZNF567Q8N184 647 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 CAMKK1Q8N5S9 505 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 CNTD1Q8N815 330 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 CCDC89Q8N998 374 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 PIP4K2CQ8TBX8 421 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms