RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 GPR27Q9NS67 375 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 TAS2R14Q9NYV8 317 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 A0A1W2PQC6 194 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 EIF3CLB5ME19 914 aaKnown RBP20.46■□□□□ 0.87
CLN6-207ENST00000566347 FPGTO14772 594 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 SIGLEC6O43699 453 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 PIAS2O75928 621 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 ACP1P24666 158 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 ABL2P42684 1182 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 RABIFP47224 123 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 TPI1P60174 286 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 RHOAP61586 193 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 MAMLD1Q13495 774 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 SERINC3Q13530 473 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 ATXN7L2Q5T6C5 722 aaPredicted RBP20.46■□□□□ 0.87
CLN6-207ENST00000566347 PLEKHA7Q6IQ23 1121 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 DENND6BQ8NEG7 585 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 HMCESQ96FZ2 354 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 BMFQ96LC9 184 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 KLHL32Q96NJ5 620 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 EIF3CQ99613 913 aaKnown RBP20.46■□□□□ 0.87
CLN6-207ENST00000566347 MFHAS1Q9Y4C4 1052 aa20.46■□□□□ 0.87
CLN6-207ENST00000566347 TDRD6O60522 2096 aaKnown RBP20.46■□□□□ 0.87
CLN6-207ENST00000566347 POM121BA6NF01 834 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 NEMP2A6NFY4 417 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 IGLON5A6NGN9 336 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 TMCO5BA8MYB1 307 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 TRIM38O00635 465 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 ALPPL2P10696 532 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 PSMA2P25787 234 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 ZNF165P49910 485 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 OGDHQ02218 1023 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 CYP4F3Q08477 520 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 HES3Q5TGS1 186 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 VOPP1Q96AW1 172 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 UCKL1Q9NWZ5 548 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 DNAJC28Q9NX36 388 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 AIPL1Q9NZN9 384 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 AP4E1Q9UPM8 1137 aa20.45■□□□□ 0.86
CLN6-207ENST00000566347 AREL1O15033 823 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 RAD51BO15315 384 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 GZMAP12544 262 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 NDST2P52849 883 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 HNRNPKP61978 463 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLN6-207ENST00000566347 DAB2P98082 770 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
CLN6-207ENST00000566347 TTC7BQ86TV6 843 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 PARGQ86W56 976 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 NXPE2Q96DL1 559 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 KLF6Q99612 283 aaPredicted RBP20.44■□□□□ 0.86
CLN6-207ENST00000566347 EDEM3Q9BZQ6 932 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 KLC2Q9H0B6 622 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 HAUS4Q9H6D7 363 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 NLGN3Q9NZ94 848 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 DKK3Q9UBP4 350 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 UBA2Q9UBT2 640 aaPredicted RBP20.44■□□□□ 0.86
CLN6-207ENST00000566347 IPO11Q9UI26 975 aaKnown RBP20.44■□□□□ 0.86
CLN6-207ENST00000566347 RALYQ9UKM9 306 aaKnown RBP20.44■□□□□ 0.86
CLN6-207ENST00000566347 LHX6Q9UPM6 363 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 ITM2BQ9Y287 266 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 GPSM3Q9Y4H4 160 aa20.44■□□□□ 0.86
CLN6-207ENST00000566347 SPTY2D1-AS1A0A0U1RR47 76 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 A0A1B0GTH6 734 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 H3BM21 787 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 FFAR2O15552 330 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 RNF8O76064 485 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 PRKCIP41743 596 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 SUOXP51687 545 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 E2F1Q01094 437 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 FZD2Q14332 565 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 GRM3Q14832 879 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 ERMARDQ5T6L9 678 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 CACTIN-AS1Q8N1I8 211 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 FNIP1Q8TF40 1166 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 RFFLQ8WZ73 363 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 DUSP23Q9BVJ7 150 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 C1QTNF7Q9BXJ2 289 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 CPEB1Q9BZB8 566 aaKnown RBP20.43■□□□□ 0.86
CLN6-207ENST00000566347 LRRC19Q9H756 370 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 GGT7Q9UJ14 662 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 RAXQ9Y2V3 346 aa20.43■□□□□ 0.86
CLN6-207ENST00000566347 ITPR1Q14643 2758 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 TMEM191CA6NGB0 347 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 EEF2KO00418 725 aaKnown RBP20.42■□□□□ 0.86
CLN6-207ENST00000566347 SCAMP1O15126 338 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 SPINT1O43278 529 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 ATMINO43313 823 aaPredicted RBP20.42■□□□□ 0.86
CLN6-207ENST00000566347 FTLP02792 175 aaPredicted RBP20.42■□□□□ 0.86
CLN6-207ENST00000566347 CSF2P04141 144 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 NME1P15531 152 aaKnown RBP20.42■□□□□ 0.86
CLN6-207ENST00000566347 KLHL30Q0D2K2 578 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 TARDBPQ13148 414 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLN6-207ENST00000566347 PDE1CQ14123 709 aaPredicted RBP20.42■□□□□ 0.86
CLN6-207ENST00000566347 ZNF571Q7Z3V5 609 aaPredicted RBP20.42■□□□□ 0.86
CLN6-207ENST00000566347 DNAAF5Q86Y56 855 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 HCAR2Q8TDS4 363 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 CXorf40AQ8TE69 158 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 TRIM11Q96F44 468 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 NCAPGQ9BPX3 1015 aa20.42■□□□□ 0.86
CLN6-207ENST00000566347 DHX35Q9H5Z1 703 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms