RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SIX6OS1Q8N1H7 587 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 B3GALNT2Q8NCR0 500 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 ADAMTS16Q8TE57 1224 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 KCTD4Q8WVF5 259 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 USP13Q92995 863 aaPredicted RBP21.83■■□□□ 1.09
SPSB3-208ENST00000566339 TRMOQ9BU70 441 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 VTA1Q9NP79 307 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 SPAG4Q9NPE6 437 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 TBCCD1Q9NVR7 557 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 ARMC1Q9NVT9 282 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 CD300AQ9UGN4 299 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 RNF11Q9Y3C5 154 aa21.83■■□□□ 1.09
SPSB3-208ENST00000566339 PDCD11Q14690 1871 aaKnown RBP21.82■■□□□ 1.08
SPSB3-208ENST00000566339 PDGFRBP09619 1106 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 PAMP19021 973 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 NUP107P57740 925 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 IL23RQ5VWK5 629 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 PPP4R4Q6NUP7 873 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 C8orf82Q6P1X6 216 aaPredicted RBP21.82■■□□□ 1.08
SPSB3-208ENST00000566339 ERO1BQ86YB8 467 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 GALNT4Q8N4A0 578 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 AGR3Q8TD06 166 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 ZUFSPQ96AP4 578 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 TMA16Q96EY4 203 aaKnown RBP21.82■■□□□ 1.08
SPSB3-208ENST00000566339 WDR6Q9NNW5 1121 aaKnown RBP21.82■■□□□ 1.08
SPSB3-208ENST00000566339 PIGVQ9NUD9 493 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 IRAK4Q9NWZ3 460 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 ADA2Q9NZK5 511 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 BBIP1A8MTZ0 92 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 HUS1O60921 280 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 USP12O75317 370 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 ANXA9O76027 345 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 AMHP03971 560 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 BMP2P12643 396 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 HOXA11P31270 313 aaPredicted RBP21.82■■□□□ 1.08
SPSB3-208ENST00000566339 ZBTB17Q13105 803 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 MFSD2AQ8NA29 543 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 ROPN1LQ96C74 230 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 CAPNS2Q96L46 248 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 APBA2Q99767 749 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 RHOBTB2Q9BYZ6 727 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 COQ10BQ9H8M1 238 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 CNGB3Q9NQW8 809 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 CACNA2D2Q9NY47 1150 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 ZNHIT2Q9UHR6 403 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 PACSIN3Q9UKS6 424 aa21.82■■□□□ 1.08
SPSB3-208ENST00000566339 NRCAMQ92823 1304 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 RRN3P2A6NIE6 340 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 AHSGP02765 367 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 MYL3P08590 195 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 LMO2P25791 158 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 CYP2C18P33260 490 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 HTR7P34969 479 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 TMEM198Q66K66 360 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 PRMT9Q6P2P2 845 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 SLC22A9Q8IVM8 553 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 RBM12BQ8IXT5 1001 aaKnown RBP21.81■■□□□ 1.08
SPSB3-208ENST00000566339 ACVR1CQ8NER5 493 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 TNIP2Q8NFZ5 429 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 SPPL2BQ8TCT7 592 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 C18orf25Q96B23 403 aaPredicted RBP21.81■■□□□ 1.08
SPSB3-208ENST00000566339 CDCA5Q96FF9 252 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 RMND5BQ96G75 393 aaPredicted RBP21.81■■□□□ 1.08
SPSB3-208ENST00000566339 FCRL5Q96RD9 977 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 NPAS2Q99743 824 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 PRKD2Q9BZL6 878 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 TRIM15Q9C019 465 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 UPF3AQ9H1J1 476 aaKnown RBP21.81■■□□□ 1.08
SPSB3-208ENST00000566339 CLK4Q9HAZ1 481 aaKnown RBP21.81■■□□□ 1.08
SPSB3-208ENST00000566339 TMEM181Q9P2C4 612 aa21.81■■□□□ 1.08
SPSB3-208ENST00000566339 FAM95CA0A1B0GW59 222 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 C7orf72A4D263 438 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 HNRNPRO43390 633 aaKnown RBP21.8■■□□□ 1.08
SPSB3-208ENST00000566339 SNRPB2P08579 225 aaKnown RBP21.8■■□□□ 1.08
SPSB3-208ENST00000566339 IMPDH2P12268 514 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 TKTP29401 623 aaKnown RBP21.8■■□□□ 1.08
SPSB3-208ENST00000566339 TTKP33981 857 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 ADARP55265 1226 aaKnown RBP21.8■■□□□ 1.08
SPSB3-208ENST00000566339 PDAP1Q13442 181 aaKnown RBP21.8■■□□□ 1.08
SPSB3-208ENST00000566339 TSTD2Q5T7W7 516 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 INTS11Q5TA45 600 aaKnown RBP21.8■■□□□ 1.08
SPSB3-208ENST00000566339 REP15Q6BDI9 236 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 KRT80Q6KB66 452 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 GALNT7Q86SF2 657 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 TERB1Q8NA31 727 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 PPHLN1Q8NEY8 458 aaKnown RBP21.8■■□□□ 1.08
SPSB3-208ENST00000566339 ATP6V1E2Q96A05 226 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 LPIN3Q9BQK8 851 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 C16orf70Q9BSU1 422 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 ADAMTS10Q9H324 1103 aa21.8■■□□□ 1.08
SPSB3-208ENST00000566339 A0A087WXM4 84 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 A0A0J9YVX5 310 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PSMD12O00232 456 aaPredicted RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 UBDO15205 165 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PHGDHO43175 533 aaKnown RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 PYGLP06737 847 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 RBP1P09455 135 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 HOXD8P13378 290 aaPredicted RBP21.79■■□□□ 1.08
SPSB3-208ENST00000566339 CCNCP24863 283 aa21.79■■□□□ 1.08
SPSB3-208ENST00000566339 IREB2P48200 963 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms