RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ILKQ13418 452 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 ZNF542PQ5EBM4 170 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 ZNF354CQ86Y25 554 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 OR4C6Q8NH72 309 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 IFT43Q96FT9 208 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 RTN4Q9NQC3 1192 aaKnown RBP18.59■□□□□ 0.57
USB1-213ENST00000566292 FFAR2O15552 330 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 CCDC172P0C7W6 258 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 TNFAIP3P21580 790 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 AIF1P55008 147 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 YBEYP58557 167 aaPredicted RBP18.58■□□□□ 0.56
USB1-213ENST00000566292 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.56
USB1-213ENST00000566292 SERINC3Q13530 473 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 FZD2Q14332 565 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 LRRC73Q5JTD7 316 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 TPRG1LQ5T0D9 272 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 DCUN1D2Q6PH85 259 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 KDM7AQ6ZMT4 941 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 ZSCAN30Q86W11 494 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 DNAAF5Q86Y56 855 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 DCP2Q8IU60 420 aaKnown RBP18.58■□□□□ 0.56
USB1-213ENST00000566292 GDAP1L1Q96MZ0 367 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 LENG8Q96PV6 779 aaPredicted RBP18.58■□□□□ 0.56
USB1-213ENST00000566292 EPAS1Q99814 870 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 BPIFA3Q9BQP9 254 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 OSBPL1AQ9BXW6 950 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 TTYH3Q9C0H2 523 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 MYO6Q9UM54 1294 aa18.58■□□□□ 0.56
USB1-213ENST00000566292 SPTY2D1-AS1A0A0U1RR47 76 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 LRRC53A6NM62 1247 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 TMCO5BA8MYB1 307 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 AREL1O15033 823 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 ATMINO43313 823 aaPredicted RBP18.57■□□□□ 0.56
USB1-213ENST00000566292 SGCGQ13326 291 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 MAMLD1Q13495 774 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 COL28A1Q2UY09 1125 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 INO80DQ53TQ3 878 aaPredicted RBP18.57■□□□□ 0.56
USB1-213ENST00000566292 E4F1Q66K89 784 aaPredicted RBP18.57■□□□□ 0.56
USB1-213ENST00000566292 GDPD4Q6W3E5 623 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 TMC6Q7Z403 805 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 UMODL1-AS1Q8N2C9 162 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 CASKIN2Q8WXE0 1202 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 ASB12Q8WXK4 309 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 RFFLQ8WZ73 363 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 VCPIP1Q96JH7 1222 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 NAT10Q9H0A0 1025 aaKnown RBP18.57■□□□□ 0.56
USB1-213ENST00000566292 CATSPERBQ9H7T0 1116 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 GPATCH2LQ9NWQ4 482 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 DNAJC28Q9NX36 388 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 LHX3Q9UBR4 397 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 KLF15Q9UIH9 416 aa18.57■□□□□ 0.56
USB1-213ENST00000566292 NEMP1O14524 444 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 FPGTO14772 594 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 INSIG1O15503 277 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 IGSF6O95976 241 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 HOXB3P14651 431 aaPredicted RBP18.56■□□□□ 0.56
USB1-213ENST00000566292 ITIH2P19823 946 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 RABIFP47224 123 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 RHOAP61586 193 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 DAB2P98082 770 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 INSM1Q01101 510 aaPredicted RBP18.56■□□□□ 0.56
USB1-213ENST00000566292 CYTH1Q15438 398 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 PARP15Q460N3 678 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 PLEKHA7Q6IQ23 1121 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 ARFGAP1Q8N6T3 406 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 DENND6BQ8NEG7 585 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 HNRNPLLQ8WVV9 542 aaKnown RBP18.56■□□□□ 0.56
USB1-213ENST00000566292 LRRC19Q9H756 370 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 MFHAS1Q9Y4C4 1052 aa18.56■□□□□ 0.56
USB1-213ENST00000566292 ASXL3Q9C0F0 2248 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 LY6G6EA0A0G2JKS1 128 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 SCAMP1O15126 338 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 FGF10O15520 208 aaPredicted RBP18.55■□□□□ 0.56
USB1-213ENST00000566292 NEBLO76041 1014 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 CSF2P04141 144 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 CKMT1AP12532 417 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 MYF5P13349 255 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 NME1P15531 152 aaKnown RBP18.55■□□□□ 0.56
USB1-213ENST00000566292 TIMP2P16035 220 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 PSMA2P25787 234 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 TPI1P60174 286 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 PFN3P60673 137 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 HNRNPKP61978 463 aaKnown RBP eCLIP18.55■□□□□ 0.56
USB1-213ENST00000566292 RAD51Q06609 339 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 PDE1CQ14123 709 aaPredicted RBP18.55■□□□□ 0.56
USB1-213ENST00000566292 CA9Q16790 459 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 HS1BP3Q53T59 392 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 ZNF571Q7Z3V5 609 aaPredicted RBP18.55■□□□□ 0.56
USB1-213ENST00000566292 TTC7BQ86TV6 843 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 PARGQ86W56 976 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 CENPTQ96BT3 561 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 NXPE2Q96DL1 559 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 ARHGEF26Q96DR7 871 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 EXOC2Q96KP1 924 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 PEBP4Q96S96 227 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 TRIM7Q9C029 511 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 HAUS4Q9H6D7 363 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 PDFQ9HBH1 243 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 PARVAQ9NVD7 372 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 NLGN3Q9NZ94 848 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms