RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 LRMPQ12912 555 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 PGM5Q15124 567 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 SYTL3Q4VX76 610 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 PRAMEF17Q5VTA0 474 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 GPR139Q6DWJ6 353 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 NAA16Q6N069 864 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 LRIG3Q6UXM1 1119 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 TRIM74Q86UV6 250 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 TRIM73Q86UV7 250 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 TICAM1Q8IUC6 712 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 KIAA2013Q8IYS2 634 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 OR4N2Q8NGD1 307 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 SARAFQ96BY9 339 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 C1orf74Q96LT6 269 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 EFHD1Q9BUP0 239 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 DUSP26Q9BV47 211 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 ACTR5Q9H9F9 607 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 MOV10Q9HCE1 1003 aaKnown RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 ASAH2Q9NR71 780 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 DLGAP2Q9P1A6 1054 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 CFDP1Q9UEE9 299 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 GIMAP2Q9UG22 337 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 CHORDC1Q9UHD1 332 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 MTMR6Q9Y217 621 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 SESN1Q9Y6P5 492 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 A0A1W2PRQ8 180 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 SH2B2O14492 632 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-209ENST00000566240 SLC25A17O43808 307 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 TFP02787 698 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 LCKP06239 509 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 CD63P08962 238 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 PRR35P0CG20 571 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 CDAP32320 146 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 SLC12A2P55011 1212 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 HDAC4P56524 1084 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 CLDN2P57739 230 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 PSMC6P62333 389 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 SLC18A2Q05940 514 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 OLIG2Q13516 323 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 FGFBP1Q14512 234 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 ALG11Q2TAA5 492 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 SUMO4Q6EEV6 95 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 RPUSD3Q6P087 351 aaKnown RBP5.27□□□□□ -1.57
CNOT1-209ENST00000566240 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 ANKRD23Q86SG2 305 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 TBC1D26Q86UD7 250 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 IGFN1Q86VF2 1251 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 DHX40Q8IX18 779 aaKnown RBP5.27□□□□□ -1.57
CNOT1-209ENST00000566240 CADM3Q8N126 398 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 SCML4Q8N228 414 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 BCAS4Q8TDM0 211 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 PABPC5Q96DU9 382 aaKnown RBP5.27□□□□□ -1.57
CNOT1-209ENST00000566240 PGAM5Q96HS1 289 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 BAG1Q99933 345 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-209ENST00000566240 NUF2Q9BZD4 464 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 KLK15Q9H2R5 256 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 PLEKHA4Q9H4M7 779 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 KIF9Q9HAQ2 790 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 SLC6A13Q9NSD5 602 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 MORF4L1Q9UBU8 362 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 TLK1Q9UKI8 766 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 FAM96BQ9Y3D0 163 aa5.27□□□□□ -1.57
CNOT1-209ENST00000566240 DPPA5A6NC42 116 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 DDTLA6NHG4 134 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 NPIPB11E5RHQ5 1161 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 SEC14L5O43304 696 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 ENTPD3O75355 529 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 TMCC1O94876 653 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 GCP02774 474 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 WNT1P04628 370 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 RB1P06400 928 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 HOXB5P09067 269 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 KRT10P13645 584 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 KRT4P19013 534 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 PTGER1P34995 402 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 CENPAP49450 140 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 CLCNKBP51801 687 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 F2RL1P55085 397 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 PMPCAQ10713 525 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 RASA2Q15283 850 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 PROSER3Q2NL68 480 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 BMP2KLQ5H9B9 411 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 EARS2Q5JPH6 523 aaKnown RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 ZNF813Q6ZN06 617 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 FAM83HQ6ZRV2 1179 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 TDRPQ86YL5 185 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 ADGRF4Q8IZF3 695 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 OSR1Q8TAX0 266 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 ATOH1Q92858 354 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 MAP4K1Q92918 833 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 ZKSCAN4Q969J2 545 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 RADILQ96JH8 1075 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 ZMAT2Q96NC0 199 aaKnown RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 BBS4Q96RK4 519 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 PRRX2Q99811 253 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 NCAPGQ9BPX3 1015 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 PIMREGQ9BSJ6 248 aa5.26□□□□□ -1.57
CNOT1-209ENST00000566240 ZCCHC17Q9NP64 241 aaKnown RBP5.26□□□□□ -1.57
CNOT1-209ENST00000566240 PLK2Q9NYY3 685 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms