RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NKX1-1Q15270 411 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 PCSK7Q16549 785 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 FAM47AQ5JRC9 791 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ANGEL2Q5VTE6 544 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 PLEKHG7Q6ZR37 379 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ARCQ7LC44 396 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 FOXRED2Q8IWF2 684 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 FAM20AQ96MK3 541 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TCEAL7Q9BRU2 100 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 TOR3AQ9H497 397 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PCDH9Q9HC56 1237 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 CPNE5Q9HCH3 593 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MAD2L2Q9UI95 211 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 LRP5O75197 1615 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MYH7P12883 1935 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MAGEB6P1A0A0J9YX57 407 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PDHXO00330 501 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ZNF197O14709 1029 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MUSKO15146 869 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 GSRP00390 522 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ACADMP11310 421 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 IL32P24001 234 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PRKAA2P54646 552 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ACOX1Q15067 660 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 FASTKD1Q53R41 847 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 NHSL2Q5HYW2 709 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 C9orf131Q5VYM1 1079 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 RINT1Q6NUQ1 792 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 LAYNQ6UX15 382 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ZNF574Q6ZN55 896 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 WDR49Q8IV35 697 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 P3H2Q8IVL5 708 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SLC44A2Q8IWA5 706 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 SIX6OS1Q8N1H7 587 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 CAMKK1Q8N5S9 505 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 BRSK1Q8TDC3 778 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ELMO2Q96JJ3 720 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 C1orf50Q9BV19 199 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 C20orf27Q9GZN8 174 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 POLE4Q9NR33 117 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SMOXQ9NWM0 555 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PAK1IP1Q9NWT1 392 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 UBA2Q9UBT2 640 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 BAG5Q9UL15 447 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 A0A0X1KG70 313 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RAB19A4D1S5 217 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 TMEM191CA6NGB0 347 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 NEMP1O14524 444 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MLYCDO95822 493 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MPOP05164 745 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 TMEM191BP0C7N4 346 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 CSH1P0DML2 217 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 CSH2P0DML3 217 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 CYP2C18P33260 490 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ASMTP46597 345 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 HARS2P49590 506 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 COPAP53621 1224 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 KNOP1Q1ED39 458 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 MFSD7Q6UXD7 560 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 TIFABQ6ZNK6 161 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SLC26A11Q86WA9 606 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 FAM109AQ8N4B1 249 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 FBXO36Q8NEA4 188 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 DLG3Q92796 817 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 DCAF5Q96JK2 942 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 STRA6Q9BX79 667 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 GDAP2Q9NXN4 497 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 BARHL2Q9NY43 387 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 DNPEPQ9ULA0 475 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ZSCAN5BA6NJL1 495 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ZSCAN5DPP0CG00 497 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SDHBP21912 280 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MAGEA3P43357 314 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 PTPN9P43378 593 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 NAMPTP43490 491 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RFTN1Q14699 578 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 STILQ15468 1287 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 AGAP6Q5VW22 663 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 BBS12Q6ZW61 710 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SSX8Q7RTT4 187 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RCN3Q96D15 328 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 AGAP4Q96P64 663 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 PDZD7Q9H5P4 517 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RMND5AQ9H871 391 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 TRMT13Q9NUP7 481 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 CACNA2D2Q9NY47 1150 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 VPS9D1Q9Y2B5 631 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RAD54BQ9Y620 910 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 DPYSL4O14531 572 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SLC9A3R1O14745 358 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 PAPSS1O43252 624 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 VAPBO95292 243 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 NADKO95544 446 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 C7P10643 843 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ERCC2P18074 760 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 POLR2IP36954 125 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 ELK3P41970 407 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RAP1GAPP47736 663 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 NFX1Q12986 1120 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms