RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 GDF3Q9NR23 364 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 SPTLC3Q9NUV7 552 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 INTUQ9ULD6 942 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 CABIN1Q9Y6J0 2220 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 C16orf96A6NNT2 1141 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 J3KR12 359 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 YKT6O15498 198 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 FLRT2O43155 660 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 TSPAN6O43657 245 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 AKT2P31751 481 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 ARHGAP25P42331 645 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 CYTH1Q15438 398 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 ZNF423Q2M1K9 1284 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 INAVAQ3KP66 663 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 TMCO4Q5TGY1 634 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 LAYNQ6UX15 382 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 NAXDQ8IW45 347 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 MAP7D3Q8IWC1 876 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 FAM174AQ8TBP5 190 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 KLHL32Q96NJ5 620 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 ZNF599Q96NL3 588 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 DKK3Q9UBP4 350 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 LHX3Q9UBR4 397 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 IPO11Q9UI26 975 aaKnown RBP20.13■□□□□ 0.81
CMTM3-211ENST00000565922 FNDC3AQ9Y2H6 1198 aaKnown RBP20.13■□□□□ 0.81
CMTM3-211ENST00000565922 PCDHB9Q9Y5E1 797 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 FADS3Q9Y5Q0 445 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 SPTBN2O15020 2390 aa20.13■□□□□ 0.81
CMTM3-211ENST00000565922 A0A1W2PR77 199 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 TLR4O00206 839 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 RNF103O00237 685 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 NEMP1O14524 444 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 HNRNPA2B1P22626 353 aaKnown RBP20.12■□□□□ 0.81
CMTM3-211ENST00000565922 AMPD1P23109 780 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 GKP32189 559 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 RENBPP51606 427 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 SUOXP51687 545 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 PDK2Q15119 407 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 CFAP58Q5T655 872 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 TXNRD3NBQ6F5E7 133 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 BBS5Q8N3I7 341 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 SLC35G2Q8TBE7 412 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 FAM71BQ8TC56 605 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 HCAR2Q8TDS4 363 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 NSMCE1Q8WV22 266 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 RFFLQ8WZ73 363 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 TSC1Q92574 1164 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 EXOC2Q96KP1 924 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 TUBGCP5Q96RT8 1024 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 ZNF670Q9BS34 389 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 RBSNQ9H1K0 784 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 IL21RQ9HBE5 538 aa20.12■□□□□ 0.81
CMTM3-211ENST00000565922 LUC7LQ9NQ29 371 aaKnown RBP20.12■□□□□ 0.81
CMTM3-211ENST00000565922 SLC31A1O15431 190 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 MTA2O94776 668 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 GJC1P36383 396 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 CSNK1DP48730 415 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ARRB1P49407 418 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ZNF75DP51815 510 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ZNF284Q2VY69 593 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 TMEM259Q4ZIN3 620 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ZFYVE27Q5T4F4 411 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 N4BP2L1Q5TBK1 243 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-211ENST00000565922 LRRC49Q8IUZ0 686 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ATPAF2Q8N5M1 289 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 TC2NQ8N9U0 490 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 KCTD6Q8NC69 237 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ZNF641Q96N77 438 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ELF4Q99607 663 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-211ENST00000565922 CALN1Q9BXU9 219 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 ERVMER34-1Q9H9K5 563 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 SEPT3Q9UH03 358 aa20.11■□□□□ 0.81
CMTM3-211ENST00000565922 GIPC1O14908 333 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 SH3BP5O60239 455 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 PCDHGA12O60330 932 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 WNT1P04628 370 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 XPAP23025 273 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-211ENST00000565922 SERPINA4P29622 427 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 HSPA9P38646 679 aaKnown RBP20.1■□□□□ 0.81
CMTM3-211ENST00000565922 NXPH1P58417 271 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 NSUN2Q08J23 767 aaKnown RBP eCLIP20.1■□□□□ 0.81
CMTM3-211ENST00000565922 MESDQ14696 234 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 TTC7BQ86TV6 843 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 CCDC170Q8IYT3 715 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 TMEM145Q8NBT3 493 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 SETD7Q8WTS6 366 aaKnown RBP20.1■□□□□ 0.81
CMTM3-211ENST00000565922 SLC17A9Q9BYT1 436 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 ATP13A3Q9H7F0 1226 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 LRRK1Q38SD2 2015 aa20.1■□□□□ 0.81
CMTM3-211ENST00000565922 A0A1B0GTQ1 180 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 H0Y8X5 98 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 PRLRP16471 622 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 CYLC1P35663 651 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-211ENST00000565922 ABL2P42684 1182 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 ELP6Q0PNE2 266 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 SGCGQ13326 291 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 DPYSL3Q14195 570 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 ZNF235Q14590 738 aa20.09■□□□□ 0.81
CMTM3-211ENST00000565922 LBRQ14739 615 aaKnown RBP20.09■□□□□ 0.81
CMTM3-211ENST00000565922 SEL1L3Q68CR1 1132 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms