RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ELMO2Q96JJ3 720 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 OSBPL2Q9H1P3 480 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SLC2A6Q9UGQ3 507 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 NUP107P57740 925 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ADRM1Q16186 407 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ANO4Q32M45 955 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 DHFR2Q86XF0 187 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MFSD6LQ8IWD5 586 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 NAT9Q9BTE0 207 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 YIPF2Q9BWQ6 316 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C2orf40Q9H1Z8 148 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ACOT9Q9Y305 439 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C1orf232A0A0U1RR37 186 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SOWAHBA6NEL2 793 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DPYSL4O14531 572 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ERCC2P18074 760 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CDH13P55290 713 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GEN1Q17RS7 908 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NHSL2Q5HYW2 709 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 LZTR1Q8N653 840 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MLPHQ9BV36 600 aaPredicted RBP20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PDZD7Q9H5P4 517 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TBC1D23Q9NUY8 699 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TNFSF13BQ9Y275 285 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 COQ6Q9Y2Z9 468 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 RBMX2Q9Y388 322 aaKnown RBP20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SHROOM3Q8TF72 1996 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FUCA1P04066 466 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CASP2P42575 452 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 KPNA1P52294 538 aaPredicted RBP20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MTA1Q13330 715 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ITGADQ13349 1161 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ARHGAP17Q68EM7 881 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NANOGP8Q6NSW7 305 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TMEM135Q86UB9 458 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZC3HC1Q86WB0 502 aaKnown RBP20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MTG1Q9BT17 334 aaPredicted RBP20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 C1QTNF1Q9BXJ1 281 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZNF385DQ9H6B1 395 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 KLK14Q9P0G3 267 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 USP3Q9Y6I4 520 aa20.7■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TIMM44O43615 452 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MTHFD1P11586 935 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CD68P34810 354 aaPredicted RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 LAMC2Q13753 1193 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 KIF19Q2TAC6 998 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZMAT2Q96NC0 199 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SPAG4Q9NPE6 437 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 OAZ3Q9UMX2 235 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CORINQ9Y5Q5 1042 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CABYRO75952 493 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NCK1P16333 377 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SFSWAPQ12872 951 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ESRP1Q6NXG1 681 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GADL1Q6ZQY3 521 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 LYSMD3Q7Z3D4 306 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 RYBPQ8N488 228 aaPredicted RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CPSF7Q8N684 471 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NPWQ8N729 165 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CNTD1Q8N815 330 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SPPL2BQ8TCT7 592 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 HEXDCQ8WVB3 486 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GOLGA2P5Q9HBQ8 144 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DSEQ9UL01 958 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FZD10Q9ULW2 581 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 THSD7AQ9UPZ6 1657 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 COL2A1P02458 1487 aaPredicted RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 H3BMQ9 156 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NR5A2O00482 541 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CCL22O00626 93 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 OXTRP30559 389 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CXCR3P49682 368 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TAS2R39P59534 338 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SEPT6Q14141 434 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 C6orf10Q5SRN2 563 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 LDB1Q86U70 411 aaPredicted RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZC3H7AQ8IWR0 971 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 IPMKQ8NFU5 416 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MAGEE2Q8TD90 523 aaPredicted RBP20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 COG8Q96MW5 612 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 UNC93B1Q9H1C4 597 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PDGFCQ9NRA1 345 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SNTG2Q9NY99 539 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SLC8A2Q9UPR5 921 aa20.69■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MAGEA12P43365 314 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 RELAQ04206 551 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 RAB39AQ14964 217 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FUT11Q495W5 492 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 VPS26BQ4G0F5 336 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NOMO2Q5JPE7 1267 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 OTUD3Q5T2D3 398 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SLC7A14Q8TBB6 771 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PLEKHA8Q96JA3 519 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ADI1Q9BV57 179 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CROTQ9UKG9 612 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 BEST1O76090 585 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 INCA1Q0VD86 236 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 LRP8Q14114 963 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PKDCCQ504Y2 493 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 METTL7BQ6UX53 244 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms