RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TTC7BQ86TV6 843 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 RGL4Q8IZJ4 473 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 TFB1MQ8WVM0 346 aaKnown RBP16.19■□□□□ 0.18
RAB40C-208ENST00000564703 RUBCNQ92622 972 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 FATE1Q969F0 183 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 ZNF419Q96HQ0 510 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-208ENST00000564703 ZNF641Q96N77 438 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-208ENST00000564703 KLHL32Q96NJ5 620 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 LGMNQ99538 433 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 HDAC8Q9BY41 377 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 ATP13A3Q9H7F0 1226 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 NT5MQ9NPB1 228 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 SCUBE2Q9NQ36 999 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 TRMT1Q9NXH9 659 aaKnown RBP16.19■□□□□ 0.18
RAB40C-208ENST00000564703 SAE1Q9UBE0 346 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-208ENST00000564703 AMACRQ9UHK6 382 aa16.19■□□□□ 0.18
RAB40C-208ENST00000564703 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-208ENST00000564703 PLK4O00444 970 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 DDX3YO15523 660 aaKnown RBP16.18■□□□□ 0.18
RAB40C-208ENST00000564703 MTSS1O43312 755 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 JCHAINP01591 159 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 ITGB7P26010 798 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 SERPINA4P29622 427 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 PTPN7P35236 360 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 DRD3P35462 400 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 NEK3P51956 506 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 AP1S1P61966 158 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 ZNF211Q13398 564 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-208ENST00000564703 RALGPS1Q5JS13 557 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 SEL1L2Q5TEA6 688 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 ARMCX6Q7L4S7 300 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 CYP2U1Q7Z449 544 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 ZC3H18Q86VM9 953 aaKnown RBP16.18■□□□□ 0.18
RAB40C-208ENST00000564703 TEX26Q8N6G2 289 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 TTC13Q8NBP0 860 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 OR2T34Q8NGX1 318 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 HCAR2Q8TDS4 363 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 PIGKQ92643 395 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 ARRDC3Q96B67 414 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 HSPA12BQ96MM6 686 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 SUV39H2Q9H5I1 410 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 SEPT10Q9P0V9 454 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 SERGEFQ9UGK8 458 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 TPX2Q9ULW0 747 aaKnown RBP16.18■□□□□ 0.18
RAB40C-208ENST00000564703 TTLL3Q9Y4R7 772 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 PCDHGA5Q9Y5G8 931 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 GON4LQ3T8J9 2241 aa16.18■□□□□ 0.18
RAB40C-208ENST00000564703 PRR23AA6NEV1 266 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 C16orf96A6NNT2 1141 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 H7C0C1 242 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 APOC4-APOC2K7ER74 178 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 NEMP1O14524 444 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 KIF5CO60282 957 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 GFRA3O60609 400 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 FSBPO95073 299 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 PEX11BO96011 259 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 APOC2P02655 101 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 PLA2G5P39877 138 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 ATP5OP48047 213 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 METAP1P53582 386 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 POLR2LP62875 67 aaKnown RBP16.17■□□□□ 0.18
RAB40C-208ENST00000564703 XRCC4Q13426 336 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 DCAF12L1Q5VU92 463 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 KIAA0895LQ68EN5 471 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 NCEH1Q6PIU2 408 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 LRRN4Q8WUT4 740 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 SNX19Q92543 992 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 MAML1Q92585 1016 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 RAB7BQ96AH8 199 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 HAUS1Q96CS2 278 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 FEM1CQ96JP0 617 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 NUDCD1Q96RS6 583 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 POLR1EQ9GZS1 481 aaKnown RBP16.17■□□□□ 0.18
RAB40C-208ENST00000564703 ARRDC1-AS1Q9H2J1 176 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 CEP192Q8TEP8 1941 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 PLXND1Q9Y4D7 1925 aa16.17■□□□□ 0.18
RAB40C-208ENST00000564703 BCLAF3A2AJT9 711 aaKnown RBP16.16■□□□□ 0.18
RAB40C-208ENST00000564703 HACD1B0YJ81 288 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 KCNK1O00180 336 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 INSIG1O15503 277 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 PLRG1O43660 514 aaKnown RBP16.16■□□□□ 0.18
RAB40C-208ENST00000564703 PCDH8O95206 1070 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 EPN2O95208 641 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 ADRB3P13945 408 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 GNSP15586 552 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 PTGER3P43115 390 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 RGRP47804 291 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 ADPRHP54922 357 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 MAXP61244 160 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 ADCY2Q08462 1091 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 ZNF569Q5MCW4 686 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 NEK5Q6P3R8 708 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 ASCL5Q7RTU5 278 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 RABEPKQ7Z6M1 372 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
RAB40C-208ENST00000564703 CAMK1DQ8IU85 385 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 SYT12Q8IV01 421 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 REXO1L1PQ8IX06 675 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 GPR161Q8N6U8 529 aaKnown RBP16.16■□□□□ 0.18
RAB40C-208ENST00000564703 OLFM3Q96PB7 478 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms