RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 RIMKLBQ9ULI2 386 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 GMNCA6NCL1 334 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 TRIM49D1C9J1S8 452 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 PER2O15055 1255 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 NDST3O95803 873 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 KRT4P19013 534 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 CR2P20023 1033 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 SPRP35270 261 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-210ENST00000564587 CSKP41240 450 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 MAPK8P45983 427 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 ARF5P84085 180 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 IL9RQ01113 521 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 USP4Q13107 963 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 DMC1Q14565 340 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 CYTH1Q15438 398 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 KIAA0930Q6ICG6 404 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-210ENST00000564587 PACS1Q6VY07 963 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 KCNMB4Q86W47 210 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 LMNTD2Q8IXW0 634 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 ATXN2LQ8WWM7 1075 aaKnown RBP15.73■□□□□ 0.11
COMMD4-210ENST00000564587 ALG14Q96F25 216 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 FCRL3Q96P31 734 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-210ENST00000564587 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 SLC28A3Q9HAS3 691 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 CHRAC1Q9NRG0 131 aa15.73■□□□□ 0.11
COMMD4-210ENST00000564587 C20orf96Q9NUD7 363 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-210ENST00000564587 A0A1W2PPM1 405 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 TIMM44O43615 452 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 TYROBPO43914 113 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 MZF1P28698 734 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-210ENST00000564587 CSNK1DP48730 415 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 POLD2P49005 469 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 POU6F1Q14863 301 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 ZNF77Q15935 545 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 SLC5A9Q2M3M2 681 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 FSCBQ5H9T9 825 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 RBM23Q86U06 439 aaKnown RBP15.72■□□□□ 0.11
COMMD4-210ENST00000564587 CELF5Q8N6W0 485 aaKnown RBP15.72■□□□□ 0.11
COMMD4-210ENST00000564587 BANPQ8N9N5 519 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 CALML6Q8TD86 181 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 MFSD3Q96ES6 412 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 FAM167BQ9BTA0 163 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 SLC2A11Q9BYW1 496 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 NKX2-4Q9H2Z4 354 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 MKS1Q9NXB0 559 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 VPS51Q9UID3 782 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 CUL9Q8IWT3 2517 aa15.72■□□□□ 0.11
COMMD4-210ENST00000564587 MUSKO15146 869 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 TMCC1O94876 653 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 PENKP01210 267 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-210ENST00000564587 ERVK-10P10266 1014 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 CREB1P16220 341 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 NMBRP28336 390 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 CCNFP41002 786 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 NRIP1P48552 1158 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 SCNN1BP51168 640 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 AP1S1P61966 158 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 SULT2A1Q06520 285 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 SIRPB2Q5JXA9 342 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 TEDDM1Q5T9Z0 273 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 TTC19Q6DKK2 380 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-210ENST00000564587 TPGS1Q6ZTW0 290 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 CNTN4Q8IWV2 1026 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 C4orf33Q8N1A6 199 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 SLC25A41Q8N5S1 370 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 ANKRD42Q8N9B4 389 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 DENND1AQ8TEH3 1009 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 IRF7Q92985 503 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 APOPT1Q96IL0 206 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 CABS1Q96KC9 395 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 GDF15Q99988 308 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 TRIM56Q9BRZ2 755 aaKnown RBP15.71■□□□□ 0.11
COMMD4-210ENST00000564587 ADGRE3Q9BY15 652 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 IQCGQ9H095 443 aaKnown RBP15.71■□□□□ 0.11
COMMD4-210ENST00000564587 TREX1Q9NSU2 369 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 ABCB8Q9NUT2 735 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 MARK1Q9P0L2 795 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 NOTCH4Q99466 2003 aa15.71■□□□□ 0.11
COMMD4-210ENST00000564587 CEP290O15078 2479 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-210ENST00000564587 COPEO14579 308 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 SNAP91O60641 907 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 SIN3BO75182 1162 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 ATXN1LP0C7T5 689 aaKnown RBP15.7■□□□□ 0.1
COMMD4-210ENST00000564587 GLDCP23378 1020 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 PBX2P40425 430 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 CCT5P48643 541 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 RHOAP61586 193 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 LMAN2Q12907 356 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 THOC5Q13769 683 aaKnown RBP15.7■□□□□ 0.1
COMMD4-210ENST00000564587 SEPT6Q14141 434 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 PLEKHG6Q3KR16 790 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 TSTD2Q5T7W7 516 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 ZNF697Q5TEC3 545 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 HHATQ5VTY9 493 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 CES3Q6UWW8 571 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 KIAA0408Q6ZU52 694 aa15.7■□□□□ 0.1
COMMD4-210ENST00000564587 ZNF771Q7L3S4 317 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms